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Job DescriptionP39688
Confidence100.00%DateWed Jul 10 14:11:43 BST 2013
Rank72Aligned Residues258
% Identity27%Templatec3lijA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin dependent protein kinase with PDBTitle: crystal structure of full length cpcdpk3 (cgd5_820) in2 complex with ca2+ and amppnp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   269270.........280.........290. ........300.........310.........320.......
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Query Sequence  ESLQLIKRLGNGQFGEVWLGTWN. GNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLV
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Template Sequence  EMYQRVKKLGSGE. . . VLLCRDKVTHVERAIKIIRKSSN. . SKLLEEVAVLKLLDHPNIM
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   60.........70.. .......80.........90..... ....100.........110....
 
   328.330..... ....340.........350.........360.........370.........380......
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Query Sequence  QLYAVVSE. EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNY
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Template Sequence  KLYDFFEDKRNYYLVMECYKGGELFDEI. . IHRMKFNEVDAAVIIKQVLSGVTYLHKHNI
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   123......130.........140.........150 .........160.........170.........180
 
   387..390........ .400.........410.........420.........430.........440...
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Query Sequence  IHRDLRSANILV. . . GNGLICKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF
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Template Sequence  VHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKER. . LGTAYYIAPEVLRK. KY
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SGGGS
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   181........190.........200.........210.........220. ........230..... ..
 
   444.....450.........460.........470.........480... ......490.........500
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Query Sequence  TIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGY. . . RMPCPQDCPISLHELMI
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Template Sequence  DEKCDVWSIGVILFILLA. GYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIK
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   238.240.........250..... ....260.........270.........280.........290......
 
   501........510......... 520.........530.......
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Query Sequence  HCWKKDPEERPTFEYLQGF. . LEDYFTATEPQYQPGENL
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Template Sequence  QMLQFDSQRRISAQQALEHPWIKEMCSKKESLPSLANAI
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   297..300.........310.........320.........330.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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