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Job DescriptionP39688
Confidence100.00%DateWed Jul 10 14:11:43 BST 2013
Rank149Aligned Residues243
% Identity28%Templatec3ku2A_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-domain protein kinase 1; PDBTitle: crystal structure of inactivated form of cdpk1 from toxoplasma gondii,2 tgme49.101440
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   269270.........280.........290... ......300.. .......310.........320...
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Query Sequence  ESLQLIKRLGNGQFGEVWLGTWNGN. TKVAIKTLK. . . . PGTMSPESFLEEAQIMKKLKH
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Template Sequence  DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH
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   4950.........60.........70.........80.........90.........100........
 
   324.....330..... ....340.........350.........360.........370.........380..
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Query Sequence  DKLVQLYAVVSE. EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE
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Template Sequence  PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI. . ISRKRFSEVDAARIIRQVLSGITYMH
Template Known Secondary structure  TTB


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   109110.........120.........130.........140 .........150.........160......
 
   383......390........ .400.........410.........420.........430.........
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Query Sequence  RMNYIHRDLRSANILV. . . GNGLICKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL
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Template Sequence  KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK. . IGTAYYIAPEVLH
Template Known Secondary structure  TT


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   167..170.........180.........190.........200.........210. ........220....
 
   440.........450.........460.........470.........480.. .......490......
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Query Sequence  YGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG. . . YRMPCPQDCPISLH
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Template Sequence  . GTYDEKCDVWSTGVILYILLS. GCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAK
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   225....230.........240..... ....250.........260.........270.........280..
 
   497..500.........510.......
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Query Sequence  ELMIHCWKKDPEERPTFEYLQ
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Template Sequence  DLIRKMLTYVPSMRISARDAL
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   283......290.........300...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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