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Job DescriptionP39688
Confidence100.00%DateWed Jul 10 14:11:43 BST 2013
Rank159Aligned Residues245
% Identity21%Templatec3kl8C_
PDB info PDB header:transferase/ transferase inhibitorChain: C: PDB Molecule:calcium/calmodulin dependent protein kinase ii; PDBTitle: camkiintide inhibitor complex
Resolution3.37 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   269270.........280.........290 .........300.........310.........320.......
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Query Sequence  ESLQLIKRLGNGQFGEVWLGTW. NGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLV
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Template Sequence  DNYDV. . . . . KEELSVVRRCVHKTTGLEFAAKIINTD. . . FQKLEREARICRKLQHPNIV
Template Known Secondary structure  TT
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   11.... ....20.........30.........40.. .......50.........60..
 
   328.330..... ....340.........350.........360.........370.........380......
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Query Sequence  QLYAVVSE. EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNY
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Template Sequence  RLHDSIQEESFHYLVFDLVTGGELFEDI. . VAREFYSEADASHCIQQILESIAYCHSNGI
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   74.....80.........90.........100. ........110.........120.........130.
 
   387..390......... 400.........410.........420.........430.........440...
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Query Sequence  IHRDLRSANILVG. . . NGLICKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF
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Template Sequence  VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF. . AGTPGYLSPEVLKKDPY
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   132.......140.........150.........160.........170.. .......180.........
 
   444.....450.........460.........470.........480......... 490.........500
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Query Sequence  TIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQ. . . DCPISLHELMI
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Template Sequence  SKPVDIWACGVILYILLV. GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID
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   190.........200....... ..210.........220.........230.........240........
 
   501........510.........520........
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Query Sequence  HCWKKDPEERPTFEYLQGFLEDYFTATE
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Template Sequence  SMLTVNPKKRITADQALK. . VPWICNRE
Template Known Secondary structure  TTS
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TT..STTTS


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   249250.........260...... ...270....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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