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Job DescriptionP39688
Confidence100.00%DateWed Jul 10 14:11:43 BST 2013
Rank187Aligned Residues237
% Identity29%Templatec3igoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-domain protein kinase 1; PDBTitle: crystal structure of cryptosporidium parvum cdpk1, cgd3_920
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   269270.........280.........290... ......300.. .......310.........320.....
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Query Sequence  ESLQLIKRLGNGQFGEVWLGTWNGN. TKVAIKTLK. . PGTMSPESFLEEAQIMKKLKHDK
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Template Sequence  ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKTSTILREVELLKKLDHPN
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B


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   74.....80.........90.........100.........110.........120.........130...
 
   326...330..... ....340.........350.........360.........370.........380....
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Query Sequence  LVQLYAVVSE. EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM
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Template Sequence  IMKLFEILEDSSSFYIVGELYTGGELFDEI. . IKRKRFSEHDAARIIKQVFSGITYMHKH
Template Known Secondary structure  B


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   135....140.........150.........160.... .....170.........180.........190..
 
   385....390........ .400.........410.........420.........430.........440.
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Query Sequence  NYIHRDLRSANILV. . . GNGLICKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG
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Template Sequence  NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTT. . . . . . . . . . AYYIAPEVLRG
Template Known Secondary structure  T


S


GGGSSSSTT


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..........GGG

GGGGGT
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   193......200.........210.........220.........230. ........240..
 
   442.......450.........460.........470.........480... ......490........
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Query Sequence  RFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGY. . . RMPCPQDCPISLHEL
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Template Sequence  TYDEKCDVWSAGVILYILLS. GTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL
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SGGGGGS
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   250.........260......... 270.........280.........290.........300........
 
   499500.........510........
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Query Sequence  MIHCWKKDPEERPTFEYLQG
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Template Sequence  IRKMLTFHPSLRITATQCLE
Template Known Secondary structure  T
SSTTTS

T
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   309310.........320........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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