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Job DescriptionP39688
Confidence99.97%DateWed Jul 10 14:11:43 BST 2013
Rank323Aligned Residues191
% Identity19%Templatec3en9B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:o-sialoglycoprotein endopeptidase/protein kinase; PDBTitle: structure of the methanococcus jannaschii kae1-bud32 fusion2 protein
Resolution2.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   267..270.........280.........290.........300....... ..310.......
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Query Sequence  PRESLQLIKRLGNGQFGEVWLGTWNGNTKVAIKTLKPGTMS. . . . . . . . . PESFLEEAQI
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Template Sequence  PNYRTDMVEVNWIGAEADIKRDSYLD. FDVIIKERVKKGYRDERLDENIRKSRTAREARY
Template Known Secondary structure  TT

GGGS






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   312.......320.........330....... ..340.........350.........360.........370
 
   318.320.........330..... ....340.........350.........360.........370......
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Query Sequence  MKKLKHDKLVQLYAVVSE. EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAA
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Template Sequence  LALVKDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIEDN. . . . . . . . . . LDIAYKIGE
Template Known Secondary structure  GGGTT




TTTT


SGGGTTTT
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   388.390.........400.........410.........420........ .430.......
 
   377..380.........390.........400.........410.........420.........430......
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Query Sequence  GMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEYTARQGAKFPIKWTAPE
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Template Sequence  IVGKLHKNDVIHNDLTTSNFIF. . DKDLYIIDFGLGKISNLDEDKAVD. . . . . . LIVFKK
Template Known Secondary structure  TT
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GGG..SSS


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   438.440.........450......... 460.........470.........480... ......
 
   437..440.........450.........460.........470.........480.
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Query Sequence  AALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVER
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Template Sequence  AVLSTHHEKFDEIWERFLEGYKSVY. DRWE. . . . IILELMKDVER
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TTT
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   490.........500.........510.... .... .520.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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