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Job DescriptionP39688
Confidence100.00%DateWed Jul 10 14:11:43 BST 2013
Rank226Aligned Residues236
% Identity26%Templatec3db8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:polo-like kinase 1; PDBTitle: crystal structure of an activated (thr->asp) polo-like2 kinase 1 (plk1) catalytic domain in complex with compound3 041
Resolution3.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   269270.........280.........290.. .......300.. .......310.........320...
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Query Sequence  ESLQLIKRLGNGQFGEVWLGTWNG. NTKVAIKTLK. . . . PGTMSPESFLEEAQIMKKLKH
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Template Sequence  KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN
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   37..40.........50.........60.........70.........80.........90......
 
   324.....330..... ....340.........350.........360.........370.........380..
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Query Sequence  DKLVQLYAVVSE. EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE
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Template Sequence  PHVVGFHGFFEDDDFVYVVLEICRRRSLLELH. . KRRKAVTEPEARYFMRQTIQGVQYLH
Template Known Secondary structure  TTB


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   97..100.........110.........120........ .130.........140.........150....
 
   383......390.........400.........410.........420.........430.........440..
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Query Sequence  RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR
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Template Sequence  NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI. . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT




GGG
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   155....160.........170.........180.......
 
   443......450.........460.........470.........480.........490.........500..
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Query Sequence  FTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMIHC
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Template Sequence  HSFEVDIWSLGCILYTLLV. GKPPFETSCLKETYIRIKKNE. YSVPRHINPVASALIRRM
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   214.....220.........230.. .......240.........250... ......260.........270.
 
   503......510.........520..... ....530.......
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Query Sequence  WKKDPEERPTFEYLQGFLEDYFT. ATEPQYQPGENL
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Template Sequence  LHADPTLRPSVAELLT. . DEFFTSGYAPMRLPTSCL
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SSGGGS

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GGGG
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   272.......280....... ..290.........300.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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