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Job DescriptionP39688
Confidence100.00%DateWed Jul 10 14:11:43 BST 2013
Rank79Aligned Residues249
% Identity25%Templatec3d9vA_
PDB info PDB header:transferaseChain: A: PDB Molecule:rho-associated protein kinase 1; PDBTitle: crystal structure of rock i bound to h-1152p a di-2 methylated variant of fasudil
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   265....270.........280.........290 .........300.. .......310.........
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Query Sequence  EIPRESLQLIKRLGNGQFGEVWLGTW. NGNTKVAIKTLK. . . . PGTMSPESFLEEAQIMK
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Template Sequence  RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA
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   70.........80.........90.........100.........110.........120.........
 
   320.........330..... ....340.........350.........360.........370........
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Query Sequence  KLKHDKLVQLYAVVSE. EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGM
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Template Sequence  FANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN. . . YDVPEKWARFYTAEVVLAL
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   130.........140.........150.........160....... ..170.........180......
 
   379380.........390.........400.........410.........420.........430........
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Query Sequence  AYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAA
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Template Sequence  DAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVL
Template Known Secondary structure  TT




GGG
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   187..190.........200.........210.........220.........230.........240......
 
   439440.........450.........460.........470.........480.. .......490.
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Query Sequence  . . . . LYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG. . . YRMPCPQDC
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Template Sequence  KSQGGDGYYGRECDWWSVGVFLYEMLV. GDTPFYADSLVGTYSKIMNHKNSLTFPDDNDI
Template Known Secondary structure  T

TT


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   247..250.........260.........270... ......280.........290.........300.....
 
   492.......500.........510 ........
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Query Sequence  PISLHELMIHCWKKDPEER. . . PTFEYLQG
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Template Sequence  SKEAKNLICAFLT. DREVRLGRNGVEEIKR
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   306...310........ .320.........330....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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