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Job DescriptionP39688
Confidence100.00%DateWed Jul 10 14:11:43 BST 2013
Rank115Aligned Residues245
% Identity26%Templatec3comB_
PDB info PDB header:transferaseChain: B: PDB Molecule:serine/threonine-protein kinase 4; PDBTitle: crystal structure of mst1 kinase
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   264.....270.........280.........290... ......300.........310.........320..
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Query Sequence  WEIPRESLQLIKRLGNGQFGEVWLGTWNGN. TKVAIKTLKPGTMSPESFLEEAQIMKKLK
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Template Sequence  TKQPEEVFDVLEKLG. . . . GSVYKAIHKETGQIVAIKQVPVES. DLQEIIKEISIMQQCD
Template Known Secondary structure  TS


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TTT

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TT

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   23......30....... ..40.........50.........60. ........70.......
 
   323......330..... ....340.........350.........360.........370.........380.
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Query Sequence  HDKLVQLYAVVSE. EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYI
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Template Sequence  SPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT. LTEDEIATILQSTLKGLEYL
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TTB

TT

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   82.......90.........100.........110.........120 .........130.........140
 
   382.......390.........400.........410.........420.........430.........440.
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Query Sequence  ERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG
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Template Sequence  HFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDMAKRNVIGTP. . . FWMAPEVIQEI
Template Known Secondary structure  TT



SGGG
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SB


S
G...GG

SSS
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   141........150.........160.........170.........180...... ...190.......
 
   442.......450.........460.........470.........480....... ..490.........
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Query Sequence  RFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPC. . PQDCPISLHELM
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Template Sequence  GYNCVADIWSLGITAIEMAE. GKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFV
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B
TT.SS
TTTTS
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SSGGGS
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   200.........210......... 220.........230.........240.........250........
 
   500.........510........
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Query Sequence  IHCWKKDPEERPTFEYLQG
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Template Sequence  KQCLVKSPEQRATATQLLQ
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S
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   259260.........270.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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