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Job DescriptionP39688
Confidence100.00%DateWed Jul 10 14:11:43 BST 2013
Rank207Aligned Residues213
% Identity27%Templatec3cokB_
PDB info PDB header:transferaseChain: B: PDB Molecule:serine/threonine-protein kinase plk4; PDBTitle: crystal structure of plk4 kinase
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   269270.........280.........290.. .......300... ......310.........320...
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Query Sequence  ESLQLIKRLGNGQFGEVWLGTWNG. NTKVAIKTLKP. . . . GTMSPESFLEEAQIMKKLKH
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Template Sequence  EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH
Template Known Secondary structure  GG
SSTTT

TT
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   910.........20.........30.........40.........50.........60........
 
   324.....330..... ....340.........350.........360.........370.........380..
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Query Sequence  DKLVQLYAVVSE. EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE
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Template Sequence  PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKP. FSENEARHFMHQIITGMLYLH
Template Known Secondary structure  TTB


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   6970.........80.........90.........100...... ...110.........120.......
 
   383......390.........400.........410.........420.........430.........440..
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Query Sequence  RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR
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Template Sequence  SHGILHRDLTLSNLLLTRNMNIKIADFGLATQ. . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT
S


GGG
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TT
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   128.130.........140.........150.........
 
   443......450.........460.........470.........480.........490.........500..
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Query Sequence  FTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMIHC
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Template Sequence  LKLESDVWSLGCMFYTLLI. GRPPFNTLNK. . . . . . . VVLADYEMPSFLSIEAKDLIHQL
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   160.........170........ .180........ .190.........200.........210.
 
   503......510........
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Query Sequence  WKKDPEERPTFEYLQG
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Template Sequence  LRRNPADRLSLSSVLD
Template Known Secondary structure  S
SSGGGS

TT
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   245....250.........260
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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