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Job DescriptionP39688
Confidence100.00%DateWed Jul 10 14:11:43 BST 2013
Rank150Aligned Residues271
% Identity23%Templatec3an0A_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:dual specificity mitogen-activated protein kinase kinase 6; PDBTitle: crystal structure of non-phosphorylated map2k6 as a putative auto2 inhibition state
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   262.......270.........280.........290 .........300.........310 .......
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Query Sequence  DVWEIPRESLQLIKRLGNGQFGEVWLGTW. NGNTKVAIKTLKPGTMSPES. . . FLEEAQI
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Template Sequence  QNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS
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   44.....50.........60.........70.........80.........90.........100...
 
   318.320.........330..... ....340.........350.... .....360.........370.....
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Query Sequence  MKKLKHDKLVQLYAVVSE. EPIYIVTEYMSKGSLLDFL. KDGEGRALKLPNLVDMAAQVA
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Template Sequence  MRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIV
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   104.....110.........120.........130.........140.........150.........160...
 
   376...380.... .....390.........400.........410.........420.........430....
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Query Sequence  AGMAYIERM. NYIHRDLRSANILVGNGLICKIADFGLARLIEDNEYTARQGAKFPIKWTA
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Template Sequence  KALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKP. . YMA
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   164.....170.........180.........190.........200.........210........ .220.
 
   435... .440.........450.........460.........470. ........480........
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Query Sequence  PEAA. . . . LYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN. . NREVLEQVERGYRMPCP
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Template Sequence  PERINPELNQKGYSVKSDIWSLGITMIELAI. LRFPYDSWGTPFQQLKQVVEEPSPQLPA
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   222.......230.........240.........250.. .......260.........270.........280
 
   489490.........500.........510.........520.........530.......
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Query Sequence  QDCPISLHELMIHCWKKDPEERPTFEYLQGFLEDYFTATEPQYQPGENL
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Template Sequence  DKFSAEFVDFTSQCLKKNSKERPTYPELMQ. . HPFFTLHESKGTDVASF
Template Known Secondary structure  GGS
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   281........290.........300.........310 .........320.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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