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Job DescriptionP39688
Confidence100.00%DateWed Jul 10 14:11:43 BST 2013
Rank88Aligned Residues244
% Identity24%Templatec2qg5D_
PDB info PDB header:transferaseChain: D: PDB Molecule:calcium/calmodulin-dependent protein kinase; PDBTitle: cryptosporidium parvum calcium dependent protein kinase cgd7_1840
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   269270.........280.........290.. .......300. ........310.........320......
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Query Sequence  ESLQLIKRLGNGQFGEVWLGTWNG. NTKVAIKTL. KPGTMSPESFLEEAQIMKKLKHDKL
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Template Sequence  QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI
Template Known Secondary structure  TTTTT

TTT
S
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BTTB
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   26...30.........40.........50.........60.........70.........80.....
 
   327..330..... ....340.........350.........360.........370.........380.....
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Query Sequence  VQLYAVVSE. EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN
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Template Sequence  IRLYETFEDNTDIYLVMELCTGGELFERV. . VHKRVFRESDAARIMKDVLSAVAYCHKLN
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SGGGGG..TTTSS

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   86...90.........100.........110.... .....120.........130.........140...
 
   386...390........ .400.........410.........420.........430.........440..
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Query Sequence  YIHRDLRSANILV. . . GNGLICKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR
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Template Sequence  VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV. . GTPYYVSPQVLEGL.
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SGGGSSSSTT




TT


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GGGS
T
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   144.....150.........160.........170.........180...... ...190.........200
 
   443......450.........460.........470.........480........ .490.........500
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Query Sequence  FTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCP. . QDCPISLHELMI
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Template Sequence  YGPECDEWSAGVMMYVLLC. GYPPFSAPTDEVMLKIREGTFTFPEKDWLNVSPQAESLIR
Template Known Secondary structure  B
TT.SS
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   201........210......... 220.........230.........240.........250.........
 
   501........510........
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Query Sequence  HCWKKDPEERPTFEYLQG
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Template Sequence  RLLTKSPKQRITSLQALE
Template Known Secondary structure  S
SSTTTS

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   261........270........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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