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Job DescriptionP39688
Confidence100.00%DateWed Jul 10 14:11:43 BST 2013
Rank285Aligned Residues245
% Identity24%Templatec2ojiA_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitogen-activated protein kinase 1; PDBTitle: crystal structure of erk2 in complex with n-benzyl-4-(4-(3-2 chlorophenyl)-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   269270.........280.........290. ........300... ......310.........320.....
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Query Sequence  ESLQLIKRLGNGQFGEVWLGTWN. GNTKVAIKTLKP. . GTMSPESFLEEAQIMKKLKHDK
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Template Sequence  PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN
Template Known Secondary structure  SSTTTTTT

TTS


TT
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   21........30.........40.........50.........60.........70.........80
 
   326...330....... ..340.........350.........360.........370.........
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Query Sequence  LVQLYAVVSEEP. . . . . . IYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMA
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Template Sequence  IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK. . . . TQHLSNDHICYFLYQILRGLK
Template Known Secondary structure  B





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   81........90.........100.........110..... ....120.........130......
 
   380.........390.........400.........410..... ....420.........430......
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Query Sequence  YIERMNYIHRDLRSANILVGNGLICKIADFGLARLI. . . EDNEYTARQGAKFPIKWTAPE
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Template Sequence  YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI
Template Known Secondary structure  TT




GGG
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GGG
B

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GGG

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   137..140.........150.........160.........170.........180.........190......
 
   437..440.........450.........460.........470.........480........
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Query Sequence  AALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCP. . . . . . . .
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Template Sequence  MLNSKGYTKSIDIWSVGCILAEMLS. NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN
Template Known Secondary structure  TB
S
ST.SS
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SSTT
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   197..200.........210.........220. ........230.........240.........250.....
 
   489490.........500.........510........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . QDCPISLHELMIHCWKKDPEERPTFEYLQG
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Template Sequence  LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA
Template Known Secondary structure  TS







TTS
T
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   256...260.........270.........280.........290.........300.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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