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Job DescriptionP39688
Confidence99.31%DateWed Jul 10 14:11:43 BST 2013
Rank499Aligned Residues70
% Identity26%Templatec2o2oA_
PDB info PDB header:protein bindingChain: A: PDB Molecule:sh3-domain kinase-binding protein 1; PDBTitle: solution structure of domain b from human cin85 protein
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   76...80.........90.........100.........110.........120.........130.....
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Query Sequence  LRTRGGTGVTLFVALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPS
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Template Sequence  TNKRGERRRRRCQVAFSYLPQNDDELELKVGDIIEVVGEVEEGWWEGVL. . NGKTGMFPS
Template Known Secondary structure 

TTSS
SS

S
B


SSS


B
SS



GGGSS
B

..TT

B
S
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   92.......100.........110.........120.........130.........140 .........
 
   136...140.......
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Query Sequence  NYVAPVDSIQAE
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Template Conservation   

  
      
Template Sequence  NFIKELSGESDE
Template Known Secondary structure  SS

SS
SST
Template Predicted Secondary structure 



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   150.........160.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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