Return to main results Retrieve Phyre Job Id

Job DescriptionP39688
Confidence99.49%DateWed Jul 10 14:11:43 BST 2013
Rank403Aligned Residues86
% Identity28%Templatec2jxbA_
PDB info PDB header:signaling protein complexChain: A: PDB Molecule:t-cell surface glycoprotein cd3 epsilon chain, PDBTitle: structure of cd3epsilon-nck2 first sh3 domain complex
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   54.....60.........70.........80.........90.........100.........110...
Predicted Secondary structure 

















































Query SS confidence 



























































Query Sequence  HAAGGQGLTVFGGVNSSSHTGTLRTRGGTGVTLFVALYDYEARTEDDLSFHKGEKFQILN
Query Conservation                                     



  
    



  

 
 
  
Alig confidence 



























































Template Conservation 
    

  
 
                       




 
    



  

 
 
  
Template Sequence  HMKERPPPVPNPDYNSLKKGSLVKNLHMTEEVIVIAKWDYTAQQDQELDIKKNERLWLLD
Template Known Secondary structure 








S


S

SSS











SS




SSSB



TT
Template Predicted Secondary structure 









































Template SS confidence 



























































   1........10.........20.........30.........40.........50.........60
 
   114.....120.........130.........140.
Predicted Secondary structure 






















Query SS confidence 



























Query Sequence  SSEGDWWEARSLTTGETGYIPSNYVAPV
Query Conservation       
        
  
  
       
Alig confidence 



.






.














Template Conservation      .

     . 
  
 

 



  
Template Sequence  DSKT. WWRVRNA. ANRTGYVPSNYVERK
Template Known Secondary structure 

SS.
T.TS
GGGB


Template Predicted Secondary structure 



.

.





Template SS confidence 



























   61... .....70. ........80......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D