Job Description P39688 Confidence 99.53% Date Wed Jul 10 14:11:43 BST 2013 Rank 395 Aligned Residues 117 % Identity 23% Template c2izvA_ PDB info PDB header:transcription Chain: A: PDB Molecule:suppressor of cytokine signaling 4; PDBTitle: crystal structure of socs-4 in complex with elongin-b and2 elongin-c at 2.55a resolution Resolution 2.55 Å

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		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	P	S	N	Y	V	A	P	V	D	S	I	Q	A	E	E	W	Y	F	G	K	L	G	R	K	D	A	E	R	Q	L	L	S	F	G	N	P	R	G	T	F	L	I	R	E	S	Q	T	T	K	G	A	Y	S	L	S	I	R	D
Query Conservation
Alig confidence																																					.	.																							.
Template Conservation																																					.	.																							.
Template Sequence		Y	F	Q	S	M	L	V	P	D	L	L	Q	I	N	N	N	P	C	Y	W	G	V	M	D	K	Y	A	A	E	A	L	L	E	G	K	.	.	P	E	G	T	F	L	L	R	D	S	A	Q	E	D	Y	L	F	S	V	S	F	R	.
Template Known Secondary structure		S							T	T								T	T															T	T		.	.		T	T								S	S	T	T		S							.
Template Predicted Secondary structure																																					.	.																							.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.			.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.
Query SS confidence																														.	.	.	.
Query Sequence		W	D	D	M	K	G	D	H	V	K	H	Y	K	I	R	K	L	D	N	G	G	Y	Y	I	T	T	R	A	.	.	.	.	Q	F	E	T	L	Q	Q	L	V	Q	H	Y	S	E	R	A	A	G	L	C	C	R	L	V	V	P	C	H
Query Conservation																														.	.	.	.
Alig confidence		.	.	.	.													.												.	.	.	.
Template Conservation		.	.	.	.													.
Template Sequence		.	.	.	.	R	Y	S	R	S	L	H	A	R	I	E	Q	.	W	N	H	N	F	S	F	D	A	H	D	P	C	V	F	H	S	P	D	I	T	G	L	L	E	H	Y	K	D	P	S	A	C	M	F	F	E	P	L	L	S	T	P
Template Known Secondary structure		.	.	.	.		T	T										.		T	T				S		T	T		T	T	S			B	S	S								T			G	G	G			T	T	S
Template Predicted Secondary structure		.	.	.	.													.
Template SS confidence
						326	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
		248	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	M	P	R	L	T	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	R	T	F	P	F	S	L
Template Known Secondary structure						S
Template Predicted Secondary structure
Template SS confidence
		381	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D