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Job DescriptionP39688
Confidence99.50%DateWed Jul 10 14:11:43 BST 2013
Rank402Aligned Residues108
% Identity22%Templatec2hmhA_
PDB info PDB header:cytokine regulatorChain: A: PDB Molecule:suppressor of cytokine signaling 3; PDBTitle: crystal structure of socs3 in complex with gp130(ptyr757)2 phosphopeptide.
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   138.140.........150.........160.........170.........180.........190.......
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Query Sequence  VAPVDSIQAEEWYFGKLGRKDAERQLLSFGNPRGTFLIRESQTTKGAYSLSIRDWDDMKG
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Template Sequence  VNAVRKLQESGFYWSAVTGGEANLLLSAE. . PAGTFLIRDSSDQRHFFTLSVK. . . . . TQ
Template Known Secondary structure  TSSTT

TS..
TT

STT
S.....T
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   35....40.........50.........60... ......70.........80..... ..
 
   198.200.........210... ......220.........230.........240.........250..
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Query Sequence  DHVKHYKIRKLDNGGY. . . . YITTRAQFETLQQLVQHYSERAAGLCCRLVVPCHKGMPR
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Template Sequence  SGTKNLRIQEGGSFSLQSDPRSTQPVPRFDVLKLVHHYMPPQAYYIYKIPLVLSRPLSS
Template Known Secondary structure  TB

TT
B
B


TT
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   88.90.........100.........110.........120.........130.........140......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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