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Job DescriptionP39688
Confidence100.00%DateWed Jul 10 14:11:43 BST 2013
Rank275Aligned Residues243
% Identity26%Templatec2dylA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity mitogen-activated protein PDBTitle: crystal structure of human mitogen-activated protein kinase2 kinase 7 activated mutant (s287d, t291d)
Resolution2.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   265....270... ......280.........290.. .......300.........310 .........
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Query Sequence  EIPRESLQL. IKRLGNGQFGEVWLGTWNG. NTKVAIKTLKPGTMSPES. . . FLEEAQIMK
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Template Sequence  TIGGQRYQAEINDLENLGEMQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLK
Template Known Secondary structure  SSS

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   123......130.........140.........150.........160.........170.........180..
 
   320.........330..... ....340.........350.........360.........370........
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Query Sequence  KLKHDKLVQLYAVVSE. EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGM
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Template Sequence  SHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKK. . RMQGPIPERILGKMTVAIVKAL
Template Known Secondary structure  TTT
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   189190.........200.........210.........220.... .....230.........240......
 
   379380. ........390.........400.........410.........420.........430.......
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Query Sequence  AYI. ERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEYTARQGAKFPIKWTAPEA
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Template Sequence  YYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGIS. . . . . . . . . . . . . . . . . . . CAAYMA
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   247..250.........260.........270.........280. ......
 
   438.440.........450.........460.........470... ......480... ......490....
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Query Sequence  ALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR. EVLEQVERGY. . RMPCPQDCPIS
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Template Sequence  PERIDYDIRADVWSLGISLVELAT. GQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGD
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   302.......310.........320..... ....330.........340.........350.........360
 
   495....500.........510...... ...520.........
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Query Sequence  LHELMIHCWKKDPEERPTFEYL. . QGFLEDYFTATEP
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Template Sequence  FQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYETLEVD
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   369370.........380.........390.........400.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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