Return to main results Retrieve Phyre Job Id

Job DescriptionP39688
Confidence99.33%DateWed Jul 10 14:11:43 BST 2013
Rank488Aligned Residues66
% Identity23%Templatec2dnuA_
PDB info PDB header:structural genomics, structural proteinChain: A: PDB Molecule:sh3 multiple domains 1; PDBTitle: solution structure of rsgi ruh-061, a sh3 domain from human
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   78.80.........90.........100.........110.........120.........130.......
Predicted Secondary structure 












































Query SS confidence 



























































Query Sequence  TRGGTGVTLFVALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNY
Query Conservation             



  
    



  

 
 
       
        
  
  
   
Alig confidence 














































..










Template Conservation 
          

  
 
    


   

 
 

      
     .. 
  
 

  
Template Sequence  SSGSSGEEKYVTVQPYTSQSKDEIGFEKGVTVEVIRKNLEGWWYIRY. . LGKEGWAPASY
Template Known Secondary structure 





S
SS
B

SSTTB

B
TT




SSS..TTGGG
Template Predicted Secondary structure 






















..


Template SS confidence 



























































   2.......10.........20.........30.........40........ .50.........
 
   138.140.....
Predicted Secondary structure 







Query SS confidence 







Query Sequence  VAPVDSIQ
Query Conservation          
Alig confidence 







Template Conservation 
       
Template Sequence  LKKAKDSG
Template Known Secondary structure 





Template Predicted Secondary structure 




Template SS confidence 







   60.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D