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Job DescriptionP39688
Confidence99.81%DateWed Jul 10 14:11:43 BST 2013
Rank332Aligned Residues117
% Identity44%Templatec2dlyA_
PDB info PDB header:transferaseChain: A: PDB Molecule:fyn-related kinase; PDBTitle: solution structure of the sh2 domain of murine fyn-related2 kinase
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   134.....140.........150.........160.........170.........180.........190...
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Query Sequence  PSNYVAPVDSIQAEEWYFGKLGRKDAERQLLSFGNPRGTFLIRESQTTKGAYSLSIRDWD
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Template Sequence  SGSSGAEDRSLQAEPWFFGAIKRADAEKQLLYSENQTGAFLIRESESQKGDFSLSVL. . .
Template Known Secondary structure  S




SSGGGGG
SSB
SS

TSSS

TT

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   3......10.........20.........30.........40.........50.........
 
   194.....200.........210.........220.........230.........240.........250...
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Query Sequence  DMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQLVQHYSERAAGLCCRLVVPCHKGMPRL
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Template Sequence  . . DEGVVKHYRIRRLDEGGFFLTRRKVFSTLNEFVNYYTTTSDGLCVKLEKPCLKIQVSG
Template Known Secondary structure  ..SSS

SSS
TTSSTT

SSSSS


SB




SSS
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   60.........70.........80.........90.........100.........110.......
 
   254.
Predicted Secondary structure 

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Query Sequence  TD
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Template Conservation 
 
Template Sequence  PS
Template Known Secondary structure 

Template Predicted Secondary structure 

Template SS confidence 

   118.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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