Return to main results Retrieve Phyre Job Id

Job DescriptionP39688
Confidence99.33%DateWed Jul 10 14:11:43 BST 2013
Rank490Aligned Residues67
% Identity27%Templatec2dilA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:proline-serine-threonine phosphatase-interacting PDBTitle: solution structure of the sh3 domain of the human proline-2 serine-threonine phosphatase-interacting protein 1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   78.80.........90.........100.........110.........120.........130.......
Predicted Secondary structure 












































Query SS confidence 



























































Query Sequence  TRGGTGVTLFVALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNY
Query Conservation             



  
    



  

 
 
       
        
  
  
   
Alig confidence 














































..










Template Conservation             

 

      


   

 
 

      
     .. 
  
 

   
Template Sequence  SSGSSGAQEYRALYDYTAQNPDELDLSAGDILEVILEGEDGWWTVER. . NGQRGFVPGSY
Template Known Secondary structure 


S





S
B

SSSSS

B
TT


SSS..TTGGG
Template Predicted Secondary structure 






















..



Template SS confidence 



























































   2.......10.........20.........30.........40........ .50.........
 
   138.140......
Predicted Secondary structure 








Query SS confidence 








Query Sequence  VAPVDSIQA
Query Conservation           
Alig confidence 








Template Conservation 
        
Template Sequence  LEKLSGPSS
Template Known Secondary structure 

B


SS
Template Predicted Secondary structure 





Template SS confidence 








   60........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D