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Job DescriptionP39688
Confidence100.00%DateWed Jul 10 14:11:43 BST 2013
Rank22Aligned Residues252
% Identity25%Templatec2acxB_
PDB info PDB header:transferaseChain: B: PDB Molecule:g protein-coupled receptor kinase 6; PDBTitle: crystal structure of g protein coupled receptor kinase 6 bound to2 amppnp
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   262.......270.........280.........290... ......300.. .......310......
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Query Sequence  DVWEIPRESLQLIKRLGNGQFGEVWLGTWNGN. TKVAIKTLK. . . . PGTMSPESFLEEAQ
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Template Sequence  ERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQ
Template Known Secondary structure  TS


GGGTTTTT

TT
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   177..180.........190.........200.........210.........220.........230......
 
   317..320.........330..... ....340.........350.........360.........370.....
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Query Sequence  IMKKLKHDKLVQLYAVVSE. EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVA
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Template Sequence  ILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHI. . YHMAGFPEARAVFYAAEIC
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TTB


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   237..240.........250.........260.........270..... ....280.........290....
 
   376...380.........390.........400.........410.........420.........430.....
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Query Sequence  AGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEYTARQGAKFPIKWTAP
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Template Sequence  CGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR. . VGTVGYMAP
Template Known Secondary structure  TT



SGGG
TTS



TT


TT



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GGG

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   297..300.........310.........320.........330.........340..... ....350....
 
   436...440.........450.........460.........470.........480.........490.....
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Query Sequence  EAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISL
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Template Sequence  EVVKNERYTFSPDWWALGCLLYEMIA. GQSPFQQKIKREEVERLVKEVPEEYSERFSPQA
Template Known Secondary structure  TT
SS.SS
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   355....360.........370.........380 .........390.........400.........410...
 
   496...500.........510 ........
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Query Sequence  HELMIHCWKKDPEER. . . . . PTFEYLQG
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Template Sequence  RSLCSQLLCKDPAERLGCRGGSAREVKE
Template Known Secondary structure  S
SSGGGSTTSSSSTT
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   417..420.........430.........440....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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