Job Description P39688 Confidence 99.93% Date Wed Jul 10 14:11:43 BST 2013 Rank 325 Aligned Residues 146 % Identity 16% Template c1zp9A_ PDB info PDB header:transferase Chain: A: PDB Molecule:rio1 kinase; PDBTitle: crystal structure of full-legnth a.fulgidus rio1 serine kinase bound2 to atp and mn2+ ions. Resolution 2.00 Å

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		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.				.	.	.	.	300	.	.	.	.	.	.	.	.															.	310	.	.	.
Predicted Secondary structure																											.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Q	L	I	K	R	L	G	N	G	Q	F	G	E	V	W	L	G	T	W	N	G	N	T	K	.	.	.	V	A	I	K	T	L	K	P	G	T	M	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	F	L	E
Query Conservation																											.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	A	X	G	G	V	I	S	T	G	K	E	A	N	V	F	Y	A	D	G	V	F	D	G	K	P	V	A	X	A	V	K	I	Y	R	I	X	D	E	Y	L	Y	G	D	E	R	F	D	X	P	K	E	K	V	F	I	W	T	E	K
Template Known Secondary structure												S	S											T	T														G	G	G	T	T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	Q	I	M	K	K	L	K	H	D	K	L	V	Q	L	Y	A	V	V	S	E	E	P	I	Y	I	V	T	E	Y	M	S	K	G	S	L	L	D	F	L	K	D	G	E	G	R	A	L	K	L	P	N	L	V	D	M	A	A	Q
Query Conservation
Alig confidence																										.
Template Conservation																										.
Template Sequence		E	F	R	N	L	E	R	A	K	E	A	G	V	S	V	P	Q	P	Y	T	Y	X	K	N	.	V	L	L	X	E	F	I	G	E	D	E	L	P	A	P	T	L	V	E	L	G	R	E	L	K	E	L	D	V	E	G	I	F	N	D
Template Known Secondary structure												T	T											T	T	.										T	T					B					G	G	G	G	G	G	S
Template Predicted Secondary structure																										.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		374	.	.	.	.	.	380	.		.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		V	A	A	G	M	A	Y	I	.	E	R	M	N	Y	I	H	R	D	L	R	S	A	N	I	L	V	G	N	G	L	I	C	K	I	A	D	F	G	L	A	R	L	I	E	D	N	E
Query Conservation										.
Alig confidence										.																		.	.
Template Conservation																												.	.
Template Sequence		V	V	E	N	V	K	R	L	Y	Q	E	A	E	L	V	H	A	D	L	S	E	Y	N	I	X	Y	.	.	I	D	K	V	Y	F	I	D	X	G	Q	A	V	T	L	R	H	P	X
Template Known Secondary structure												T	S					S	S		S	T	T	S				.	.	S	S	S							T	T				T	T	S	T	T
Template Predicted Secondary structure																												.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D