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Job DescriptionP39688
Confidence100.00%DateWed Jul 10 14:11:43 BST 2013
Rank60Aligned Residues264
% Identity37%Templatec1yvjA_
PDB info PDB header:transferaseChain: A: PDB Molecule:tyrosine-protein kinase jak3; PDBTitle: crystal structure of the jak3 kinase domain in complex with2 a staurosporine analogue
Resolution2.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   263......270.........280.........290. ........300....... ..310......
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Query Sequence  VWEIPRESLQLIKRLGNGQFGEVWLGTWN. . . . . GNTKVAIKTLKPGTMS. PESFLEEAQ
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Template Sequence  PTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQ
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B

GGG
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SSSSS
S

S

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   814.....820.........830.........840.........850.........860.........870...
 
   317..320.........330....... ..340.........350.........360.........370...
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Query Sequence  IMKKLKHDKLVQLYAVVSEEP. . . IYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQ
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Template Sequence  ILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR. LDASRLLLYSSQ
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TTB




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TT
BTTTT.

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   874.....880.........890.........900.........910.........920 .........930..
 
   374.....380.........390.........400.........410.........420.........430...
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Query Sequence  VAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEYTARQGAKFPIKWT
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Template Sequence  ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDVVREPGQSPIFWY
Template Known Secondary structure  TT
S


GGGTT


SS


TT



SS

SS
GGGS
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   933......940.........950.........960.........970.........980.........990..
 
   434.....440.........450.........460.........470 ........
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Query Sequence  APEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGM. . . . . . . . . . . . . . . NNREVLEQ
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Template Sequence  APESLSDNIFSRQSDVWSFGVVLYELFT. YCDKSCSPSAEFLRMMGCERDVPALCRLLEL
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.TT
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   995....1000.........1010.........1020.. .......1030.........1040.........1050...
 
   479480.........490.........500.........510.........520........
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Query Sequence  VERGYRMPCPQDCPISLHELMIHCWKKDPEERPTFEYLQGFLEDYFTATE
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Template Sequence  LEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR
Template Known Secondary structure  TT





TT

T
SSGGGS

T

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   1054.....1060.........1070.........1080.........1090.........1100...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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