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Job DescriptionP39688
Confidence100.00%DateWed Jul 10 14:11:43 BST 2013
Rank33Aligned Residues244
% Identity19%Templatec1ym7C_
PDB info PDB header:transferaseChain: C: PDB Molecule:beta-adrenergic receptor kinase 1; PDBTitle: g protein-coupled receptor kinase 2 (grk2)
Resolution4.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   269270.........280.........290.. .......300.........310 .........320
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Query Sequence  ESLQLIKRLGNGQFGEVWLGTWNG. NTKVAIKTLKPGTMSPES. . . . . . . FLEEAQIMKK
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Template Sequence  NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST
Template Known Secondary structure  GG
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   189190.........200.........210.........220.........230.........240........
 
   321........330..... ....340.........350.........360.........370.........
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Query Sequence  LKHDKLVQLYAVVSE. EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMA
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Template Sequence  GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL. . SQHGVFSEADMRFYAAEIILGLE
Template Known Secondary structure  S

SSB

TT


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   249250.........260.........270.........280... ......290.........300......
 
   380.........390.........400.........410.........420.........430.........
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Query Sequence  YIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL
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Template Sequence  HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTH. . . GYMAPEVLQ
Template Known Secondary structure  TT




GGG
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TT

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S
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   307..310.........320.........330.........340.........350.... .....360...
 
   440.. .......450.........460......... 470.........480.........490......
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Query Sequence  YGR. FTIKSDVWSFGILLTELVTKGRVPYPG. . MNNREVLEQVERGYRMPCPQDCPISLH
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Template Sequence  KGVAYDSSADWFSLGCMLFKLLR. GHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELR
Template Known Secondary structure  SS



T.SS
SS
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   364.....370.........380...... ...390.........400.........410.........420..
 
   497..500.........510. .......
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Query Sequence  ELMIHCWKKDPEERP. . . . . TFEYLQG
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Template Sequence  SLLEGLLQRDVNRRLGCLGRGAQEVKE
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   423......430.........440.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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