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Job DescriptionP39688
Confidence99.71%DateWed Jul 10 14:11:43 BST 2013
Rank356Aligned Residues111
% Identity27%Templatec1a81E_
PDB info PDB header:complex (transferase/peptide)Chain: E: PDB Molecule:syk kinase; PDBTitle: crystal structure of the tandem sh2 domain of the syk kinase bound to2 a dually tyrosine-phosphorylated itam
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   143......150.........160.........170.........180.........190.........200..
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Query Sequence  SIQAEEWYFGKLGRKDAERQLLSFGNPRGTFLIRESQTTKGAYSLSIRDWDDMKGDHVKH
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Template Sequence  SANHLPFFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVA. . . . . HGRKAHH
Template Known Secondary structure 
GGG
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   910.........20.........30.........40.........50...... ...60...
 
   203......210.........220.........230.........240.........250........
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Query Sequence  YKIRKLDNGGYYITTRAQFETLQQLVQHYSERAAGLCCRLVVPCHKGMPRLTDLSV
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Template Sequence  YTIERELNGTYAIAGGRTHASPADLCHYHSQESDGLVCLLKKPFNRPQGVQPKTPQ
Template Known Secondary structure  TTTTTS

BSSTT

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   64.....70.........80.........90.........100.........110.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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