Job Description Q9Z0R6 Confidence 100.00% Date Wed Jul 10 14:14:37 BST 2013 Rank 21 Aligned Residues 287 % Identity 23% Template c4h6yA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ferm, rhogef and pleckstrin domain-containing protein 1; PDBTitle: crystal strucure of the dh-ph-ph domain of farp1 Resolution 4.09 Å

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		1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	Q	G	Y	I	H	E	L	I	Q	T	E	E	R	Y	M	D	D	D	L	Q	L	V	I	E	V	F	Q	K	R	M	A	E	E	G	F	L	T	E	A	D	M	A	L	I	F	V	N	W	K	E	L	I	M	S	N	T	K	L
Query Conservation
Alig confidence																			.
Template Conservation																			.
Template Sequence		K	A	Y	F	I	A	K	E	V	S	T	T	E	R	T	Y	L	.	K	D	L	E	V	I	T	S	W	F	Q	S	T	V	S	K	E	D	A	M	P	E	A	L	K	S	L	I	F	P	N	F	E	P	L	H	K	F	H	T	N	F
Template Known Secondary structure																			.																T	T	T		S									S	T	T	T
Template Predicted Secondary structure																			.
Template SS confidence
		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.		.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.
		1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	A	L	R	V	R	K	K	T	G	G	E	K	M	P	V	Q	M	I	G	D	I	L	A	A	E	L	S	H	M	Q	A	Y	I	R	F	C	S	C	Q	L	N	G	A	T	L	L	Q	Q	K	T	D	E	D	T	D	F	K	E
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.
Template Sequence		L	K	E	I	E	Q	R	L	A	L	W	.	.	.	.	.	.	.	.	E	G	D	V	M	L	K	N	I	Q	G	M	K	H	L	A	A	H	L	W	K	H	S	E	A	L	E	A	L	E	N	G	I	K	S	S	R	R	L	E	N
Template Known Secondary structure													.	.	.	.	.	.	.	.												G	G	G	S					T	T											T	T	T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.
Template SS confidence
		599	600	.	.	.	.	.	.	.	.	.									610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650
		1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	K	K	L	A	S	D	P	R	C	K	G	M	P	L	S	S	F	L	L	K	P	M	Q	R	I	T	R	Y	P	L	L	I	R	S	I	L	E	N	T	P	Q	S	H	V	D	H	S	S	L	K	L	A	L	E	R	A	E	E
Query Conservation
Alig confidence													.																																					.	.	.	.	.	.
Template Conservation													.																																					.	.	.	.	.	.
Template Sequence		F	C	R	D	F	E	L	Q	K	V	C	.	Y	L	P	L	N	T	F	L	L	R	P	L	H	R	L	M	H	Y	K	Q	V	L	E	R	L	C	K	H	H	P	R	D	C	R	A	A	.	.	.	.	.	.	L	A	E	I	T	E
Template Known Secondary structure								T	S	S	S		.		S		G	G	G	G	G	T																												.	.	.	.	.	.
Template Predicted Secondary structure													.																																					.	.	.	.	.	.
Template SS confidence
		664	.	.	.	.	.	670	.	.	.	.		.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710							.	.	.	.	.	.
		1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	C	S	Q	V	N	E	G	V	R	E	K	E	N	S	D	R	L	E	W	I	Q	A	H	V	Q	C	E	G	L	A	E	Q	L	I	F	N	S	L	T	N	C	L	G	P	R	K	L	L	H	S	G	K	L	Y	K	T	K	S	N
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	V	A	Q	L	H	G	T	M	I	K	M	E	N	F	Q	K	L	H	E	L	K	K	D	L	I	G	I	D	.	.	.	.	.	.	.	.	.	.	.	L	V	V	P	G	R	E	F	I	R	L	G	S	L	S	K	L	S	G	K
Template Known Secondary structure						T	T	T													T	G	G	G	T			S			.	.	.	.	.	.	.	.	.	.	.				T	T														S	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		723	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.												.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.
		1410			.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		K	.	.	E	L	H	A	F	L	F	N	D	F	L	L	L	T	Y	L	V	R	Q	F	A	A	A	S	G	H	E	K	L	F	N	S	K	S	S	A	Q	F	R	M	Y	K	T	P	I	F	L	N	E	V	L	V	K	L	P	T	D
Query Conservation			.	.
Alig confidence			.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	L	Q	Q	R	M	F	F	L	F	N	D	V	L	L	Y	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	N	Q	F	K	V	H	G	Q	L	P	L	Y	G	M	T	I	E	E	S	E	D
Template Known Secondary structure		S										S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S										S	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		773	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790																				.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.
		1468	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	G	D	E	P	V	F	H	I	S	H	I	D	R	V	Y	T	L	R	T	D	N	I	N	E	R	T	A	W	V	Q	K	I	K	G	A	S	E
Query Conservation
Alig confidence					.	.	.	.
Template Conservation					.	.	.	.
Template Sequence		P	H	C	.	.	.	.	L	T	L	R	G	Q	R	Q	S	I	I	V	A	A	S	S	R	S	E	M	E	K	W	V	E	D	I	Q	M	A	I	D
Template Known Secondary structure					.	.	.	.						S	S								S	S	S	T	T
Template Predicted Secondary structure					.	.	.	.
Template SS confidence
		822	.	.					.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D