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Job DescriptionQ9Z0R6
Confidence96.82%DateWed Jul 10 14:14:37 BST 2013
Rank473Aligned Residues92
% Identity18%Templatec3tfmA_
PDB info PDB header:motor proteinChain: A: PDB Molecule:myosin x; PDBTitle: myosin x ph1n-ph2-ph1c tandem
Resolution2.53 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1393......1400...... ...1410.........1420.........1430.........1440...
Predicted Secondary structure 


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Query Sequence  GPRKLLHSGKLYKT. . . . . . . . . KSNKELHAFLFNDFLLLTYLVRQFAAASGHEKLFNSK
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Template Sequence  SKQEALKQGWLHNNGGGSSTLSRRNWKKRWFVLRQSKLMYFENDSEE. . . . . . . . . . . . .
Template Known Secondary structure  S


SS
GGG
SSS
GGG

SSSSTT

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   42.......50.........60.........70.........80........
 
   1444.....1450.........1460.........1470.........1480.........1490.........1500...
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Query Sequence  SSAQFRMYKTPIFLNEVLVKLPTDPSGDEPVFHISHIDRVYTLRTDNINERTAWVQKIKG
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Template Sequence  . . . . . . . . KLKGTVEVRSAKEIIDNTNKENGIDIIMADRTFHLIAESPEDASQWFSVLSQ
Template Known Secondary structure  ........SGGG
STTTTS
SS

SS
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   8990.........100.........110.........120.........130.........140
 
   1504.
Predicted Secondary structure 
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Query Sequence  AS
Query Conservation 
 
Alig confidence 

Template Conservation    
Template Sequence  VH
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 

   141.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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