Job Description Q9Z0R6 Confidence 99.22% Date Wed Jul 10 14:14:37 BST 2013 Rank 67 Aligned Residues 115 % Identity 23% Template c3nsjA_ PDB info PDB header:immune system Chain: A: PDB Molecule:perforin-1; PDBTitle: the x-ray crystal structure of lymphocyte perforin Resolution 2.75 Å

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		1529	1530	.	.	.	.	.	.	.	.	.	1540	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	G	R	L	M	V	H	V	I	E	A	T	E	L	K	A	C	K	P	N	G	K	S	N	P	Y	C	E	V	S	M	G	S	Q	S	Y	T	T	R	T	L	Q	D	T	L	N	P	K	W	N	F	N	C	Q	F	F	I	K	D
Query Conservation
Alig confidence																		.
Template Conservation																		.
Template Sequence		G	L	A	H	L	V	V	S	N	F	R	A	E	H	L	W	.	G	D	Y	T	T	A	T	D	A	Y	L	K	V	F	F	G	G	Q	E	F	R	T	G	V	V	W	N	N	N	N	P	R	W	T	D	K	M	D	F	E	N	V	L
Template Known Secondary structure		T													S			.		S	S		S											T	T								B		S		S	S		B
Template Predicted Secondary structure																		.
Template SS confidence
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.		.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
		1589	1590	.		.	.	.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610	.	.	.	.	.	.	.	.	.	1620	.	.	.	.	.	.	.	.	.	1630	.	.	.	.	.	.	.	.	.	1640	.	.	.	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		L	Y	Q	.	D	V	L	C	L	T	M	F	D	R	D	Q	F	S	P	D	D	F	L	G	R	T	E	V	P	V	A	K	I	R	T	E	Q	E	S	K	G	P	T	T	R	R	L	L	L	H	E	V	P	T	G	E	V	W	V	R
Query Conservation					.
Alig confidence					.																													.	.	.	.	.	.	.	.										.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.										.	.	.
Template Sequence		L	S	T	G	G	P	L	R	V	Q	V	W	D	A	D	Y	G	W	D	D	D	L	L	G	S	C	D	R	S	P	H	S	.	.	.	.	.	.	.	.	G	F	H	E	V	T	C	E	L	.	.	.	N	H	G	R	V	K	F	S
Template Known Secondary structure		T	T	T													S	S	S														S	.	.	.	.	.	.	.	.										.	.	.	S	S	S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.										.	.	.
Template SS confidence
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.									.	.	.	.	.	.	.	510	.				.	.	.	.	.	.	.	.
		1648	.	1650	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	L	Q	L	F	E	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	H	A	K	C	L	P	H
Template Known Secondary structure								T	T
Template Predicted Secondary structure
Template SS confidence
		520	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D