Job Description Q9Z0R6 Confidence 99.09% Date Wed Jul 10 14:14:37 BST 2013 Rank 78 Aligned Residues 108 % Identity 31% Template c3m7fB_ PDB info PDB header:signaling protein/ligase Chain: B: PDB Molecule:e3 ubiquitin-protein ligase nedd4; PDBTitle: crystal structure of the nedd4 c2/grb10 sh2 complex Resolution 2.00 Å

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		1530	.	.	.	.	.	.	.	.	.	1540	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.							.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.
Query Sequence		I	G	R	L	M	V	H	V	I	E	A	T	E	L	K	A	C	K	P	N	G	K	S	N	P	Y	C	E	V	S	M	G	S	.	.	.	.	.	.	Q	S	Y	T	T	R	T	L	Q	D	T	L	N	P	K	W	N	F	N	C	Q
Query Conservation																																			.	.	.	.	.	.
Alig confidence																		.	.	.															.	.	.	.	.	.
Template Conservation																		.	.	.
Template Sequence		T	R	V	V	R	V	K	V	I	A	G	I	G	L	A	I	.	.	.	L	G	A	S	D	P	Y	V	R	V	T	L	Y	D	P	M	S	G	I	L	T	S	V	Q	T	K	T	I	K	K	S	L	N	P	K	W	N	E	E	I	L
Template Known Secondary structure														S				.	.	.															T	T	T												S	S		S	S
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		1584	.	.	.	.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610	.	.	.	.	.	.	.	.	.	1620	.	.	.	.	.	.	.	.	.	1630	.	.	.	.	.	.	.	.	.	1640	.
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		F	F	I	K	D	L	Y	Q	D	V	L	C	L	T	M	F	D	R	D	Q	F	S	P	D	D	F	L	G	R	T	E	V	P	V	A	K	I	R	T	E	Q	E	S	K	G	P	T	T	R	R	L	L	L	H	E	V	P	T	.	.
Query Conservation																																																												.	.
Alig confidence									.												.	.	.	.															.	.	.	.																		.	.
Template Conservation									.												.	.	.	.															.	.	.	.
Template Sequence		F	R	V	L	P	Q	R	.	H	R	I	L	F	E	V	F	D	E	N	.	.	.	.	D	D	F	L	G	Q	V	D	V	P	L	Y	P	L	.	.	.	.	P	T	E	P	Y	T	F	K	D	F	V	L	H	P	R	S	H	K	S
Template Known Secondary structure						T	T	T	.												.	.	.	.											S		S		.	.	.	.		B											B		S	S	T	T
Template Predicted Secondary structure									.												.	.	.	.															.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.					.	.	.	.	200	.	.	.	.	.	.	.	.	.					210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
					1642	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	G	E	V	W	V	R	F	D
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		R	V	K	G	Y	L	R	L	K	M	T
Template Known Secondary structure					S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D