Job Description Q9Z0R6 Confidence 99.12% Date Wed Jul 10 14:14:37 BST 2013 Rank 76 Aligned Residues 111 % Identity 17% Template c3l9bA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:otoferlin; PDBTitle: crystal structure of rat otoferlin c2a Resolution 1.95 Å

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		1533	.	.	.	.	.	.	1540	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.		.	.	.	.	1580	.	.	.	.	.	.	.	.			.
Predicted Secondary structure																																													.														.	.
Query SS confidence																																													.														.	.
Query Sequence		L	M	V	H	V	I	E	A	T	E	L	K	A	C	K	P	N	G	K	S	N	P	Y	C	E	V	S	M	G	S	Q	S	Y	T	T	R	T	L	Q	D	T	L	N	.	P	K	W	N	F	N	C	Q	F	F	I	K	D	.	.	L
Query Conservation																																													.														.	.
Alig confidence													.	.	.	.	.																												.														.	.
Template Conservation													.	.	.	.	.
Template Sequence		L	I	V	H	L	K	T	V	S	E	L	.	.	.	.	.	R	G	R	A	D	R	I	A	K	V	T	F	R	G	Q	S	F	Y	S	R	V	L	E	N	C	E	D	V	A	D	F	D	E	T	F	R	W	P	V	A	S	S	I	D
Template Known Secondary structure											S		.	.	.	.	.		S											T	T													S													S	S
Template Predicted Secondary structure													.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.						.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
		1590	.	.	.	.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610	.	.	.	.	.	.	.	.	.	1620	.	.	.	.	.	.	.	.	.	1630	.	.	.	.	.	.	.	.	.	1640	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	D	V	L	C	L	T	M	F	D	R	D	Q	F	S	P	D	D	F	L	G	R	T	E	V	P	V	A	K	I	R	T	E	Q	E	S	K	G	P	T	T	R	R	L	L	L	H	E	V	P	T	G	E	V	W	V	R	F	D
Query Conservation
Alig confidence																																				.	.	.	.
Template Conservation																																				.	.	.	.
Template Sequence		R	N	E	V	L	E	I	Q	I	F	N	Y	S	K	V	F	S	N	K	L	I	G	T	F	R	M	V	L	Q	K	V	V	E	E	.	.	.	.	N	R	V	E	V	S	D	T	L	I	D	D	N	N	A	I	I	K	T	S	L	S
Template Known Secondary structure		T	T												T	T	S												S							.	.	.	.	S											T	T	S
Template Predicted Secondary structure																																				.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		1650	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	E	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		114	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D