Job Description Q9Z0R6 Confidence 100.00% Date Wed Jul 10 14:14:37 BST 2013 Rank 4 Aligned Residues 315 % Identity 22% Template c3ky9B_ PDB info PDB header:apoptosis Chain: B: PDB Molecule:proto-oncogene vav; PDBTitle: autoinhibited vav1 Resolution 2.73 Å Model Dimensions (Å) X:82.482 Y:63.071 Z:60.009

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		1169	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	R	Q	G	Y	I	H	E	L	I	Q	T	E	E	R	Y	M	D	D	D	L	Q	L	V	I	E	V	F	Q	K	R	M	A	E	E	G	F	L	T	E	A	D	M	A	L	I	F	V	N	W	K	E	L	I	M	S	N	T	K
Query Conservation
Alig confidence																				.																	.	.
Template Conservation																				.																	.	.
Template Sequence		D	K	R	C	C	C	L	R	E	I	Q	Q	T	E	E	K	Y	T	.	D	T	L	G	S	I	Q	Q	H	F	L	K	P	L	Q	R	.	.	F	L	K	P	Q	D	I	E	I	I	F	I	N	I	E	D	L	L	R	V	H	T	H
Template Known Secondary structure																				.										T						T	.	.	T	S		T	T	T	S
Template Predicted Secondary structure																				.																	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		1229	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	R	A	L	R	V	R	K	K	T	G	G	E	K	M	P	V	Q	M	I	G	D	I	L	A	A	E	L	S	H	M	Q	A	Y	I	R	F	C	S	C	Q	L	N	G	A	T	L	L	Q	Q	K	T	D	E	D	T	D	F	K
Query Conservation
Alig confidence																.	.	.	.
Template Conservation																.	.	.	.
Template Sequence		F	L	K	E	M	K	E	A	L	G	T	P	G	A	.	.	.	.	A	N	L	Y	Q	V	F	I	K	Y	K	E	R	F	L	V	Y	G	R	Y	C	S	Q	V	E	S	A	S	K	H	L	D	R	V	A	A	A	R	E	D	V	Q
Template Known Secondary structure												S	S	T	T	.	.	.	.		S								T	T	G	G	G	G																						T
Template Predicted Secondary structure																.	.	.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.					.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		1289	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	F	L	K	K	L	A	S	D	P	R	C	K	G	M	P	L	S	S	F	L	L	K	P	M	Q	R	I	T	R	Y	P	L	L	I	R	S	I	L	E	N	T	P	Q	S	H	V	D	H	S	S	L	K	L	A	L	E	R	A	E
Query Conservation
Alig confidence																																													.
Template Conservation																																													.
Template Sequence		M	K	L	E	E	C	S	Q	R	A	N	N	G	R	F	T	L	R	D	L	L	M	V	P	M	Q	R	V	L	K	Y	H	L	L	L	Q	E	L	V	K	H	T	Q	.	E	A	M	E	K	E	N	L	R	L	A	L	D	A	M	R
Template Known Secondary structure		T	T	T	T								T	T	S																											T			.
Template Predicted Secondary structure																																													.
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
		1349	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.		.	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		E	L	C	S	Q	V	N	E	G	V	R	E	K	E	N	S	D	R	L	E	W	I	Q	A	H	V	Q	C	E	G	L	A	E	Q	L	I	F	N	S	L	T	N	C	L	G	P	R	K	L	L	H	S	G	K	L	.	Y	K	T	K
Query Conservation																																																									.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.														.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	A	Q	C	V	N	E	V	K	R	D	N	E	T	L	R	Q	I	T	N	F	Q	L	S	I	E	N	L	D	Q	S	.	.	.	.	.	.	.	.	.	.	L	A	H	Y	G	R	P	K	I	D	G	E	L	K	I	T	S	V
Template Known Secondary structure																													T			S		.	.	.	.	.	.	.	.	.	.	G	G	G	G														S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.											.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
		1408	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.
Predicted Secondary structure																																																										.	.	.	.
Query SS confidence																																																										.	.	.	.
Query Sequence		S	N	K	E	L	H	A	F	L	F	N	D	F	L	L	L	T	Y	L	V	R	Q	F	A	A	A	S	G	H	E	K	L	F	N	S	K	S	S	A	Q	F	R	M	Y	K	T	P	I	F	L	N	E	V	L	V	K	.	.	.	.
Query Conservation																																																										.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	R	M	D	R	Y	A	F	L	L	D	K	A	L	L	I	C	K	R	R	G	D	S	Y	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	D	F	V	N	L	H	S	F	Q	V	R	D	D	S	S
Template Known Secondary structure												T	T									T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						G	G	G								S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440																			.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
		1464	.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.			.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		L	P	T	D	P	S	G	D	E	P	V	F	H	I	S	H	I	D	.	.	R	V	Y	T	L	R	T	D	N	I	N	E	R	T	A	W	V	Q	K	I	K	G	A	S	E	Q	Y	I	D	T	E	K	K	K	R	E	K	A
Query Conservation																				.	.
Alig confidence																				.	.
Template Conservation
Template Sequence		G	D	R	D	N	K	K	W	S	H	M	F	L	L	I	E	D	Q	G	A	Q	G	Y	E	L	F	F	K	T	R	E	L	K	K	K	W	M	E	Q	F	E	M	A	I	S	N	I	Y	P	E	N	A	T	A	N	G	H	D
Template Known Secondary structure		S	T	T	T	T		T	T									T	T	S	S								S	S																			S		T	T	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D