Job Description Q9Z0R6 Confidence 100.00% Date Wed Jul 10 14:14:37 BST 2013 Rank 8 Aligned Residues 319 % Identity 16% Template c3ksyA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:son of sevenless homolog 1; PDBTitle: crystal structure of the histone domain, dh-ph unit, and2 catalytic unit of the ras activator son of sevenless (sos) Resolution 3.18 Å Model Dimensions (Å) X:74.386 Y:77.501 Z:45.033

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		1171	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.		.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		R	Q	G	Y	I	H	E	L	I	Q	T	E	E	R	Y	M	D	D	D	L	Q	L	V	I	E	V	F	Q	K	R	M	A	E	E	G	.	F	L	T	E	A	D	M	A	L	I	F	V	N	W	K	E	L	I	M	S	N	T	K	L
Query Conservation																																					.
Alig confidence																			.																		.
Template Conservation																			.
Template Sequence		Y	Y	D	L	V	K	A	F	M	A	E	I	R	Q	Y	I	R	.	E	L	N	L	I	I	K	V	F	R	E	P	F	V	S	N	S	K	L	F	S	A	N	D	V	E	N	I	F	S	R	I	V	D	I	H	E	L	S	V	K	L
Template Known Secondary structure																			.								T	T								T	T	T	S										S	S
Template Predicted Secondary structure																			.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.			.	.	.	.	.	.	.	.	1270	.	.	.	.			.	.	.	.	.	1280	.	.	.	.	.
Predicted Secondary structure																																		.	.														.	.
Query SS confidence																																		.	.														.	.
Query Sequence		L	R	A	L	R	V	R	K	K	T	G	G	E	K	M	P	V	Q	M	I	G	D	I	L	A	A	E	L	S	H	M	Q	.	.	A	Y	I	R	F	C	S	C	Q	L	N	G	A	.	.	T	L	L	Q	Q	K	T	D	E	D	T
Query Conservation																																		.	.														.	.
Alig confidence																																		.	.														.	.
Template Conservation
Template Sequence		L	G	H	I	E	D	T	V	E	M	T	D	E	G	S	P	H	P	L	V	G	S	C	F	E	D	L	A	E	E	L	A	F	D	P	Y	E	S	Y	A	R	D	I	L	R	P	G	F	H	D	R	F	L	S	Q	L	S	K	P	G
Template Known Secondary structure														S	S	S	S	S													T	T	T	T	S												T	T							T	T	S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		1286	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	K	E	F	L	K	K	L	A	S	D	P	R	C	K	G	M	P	L	S	S	F	L	L	K	P	M	Q	R	I	T	R	Y	P	L	L	I	R	S	I	L	E	N	T	P	Q	S	H	V	D	H	S	S	L	K	L	A	L	E
Query Conservation
Alig confidence																																													.
Template Conservation																																													.
Template Sequence		A	A	L	Y	L	Q	S	I	G	E	G	F	K	E	A	V	Q	Y	V	L	P	R	L	L	L	A	P	V	Y	H	C	L	H	Y	F	E	L	L	K	Q	L	E	E	.	K	S	E	D	Q	E	D	K	E	C	L	K	Q	A	I	T
Template Known Secondary structure											T	T								T					T	T																			.	S
Template Predicted Secondary structure																																													.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.		.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		1346	.	.	.	1350	.	.										.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.
Query Sequence		R	A	E	E	L	C	S	.	.	.	.	.	.	.	.	.	Q	V	N	E	G	V	R	E	K	E	N	S	D	R	L	E	W	I	Q	A	H	V	Q	C	E	G	L	A	E	Q	L	I	F	N	S	L	T	N	C	L	G	P	R	K
Query Conservation									.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.
Template Sequence		A	L	L	N	V	Q	S	G	M	E	K	I	C	S	K	S	L	A	K	R	R	L	S	E	S	A	A	I	K	K	M	N	E	I	Q	K	N	I	D	.	.	.	.	.	.	.	.	G	W	E	G	K	D	I	G	Q	C	C	N	E
Template Known Secondary structure			T											T	T	S	T	T												S								T	S	S	.	.	.	.	.	.	.	.	S			S	S		G	G	G	T		S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.
Template SS confidence
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.									.	.	420	.	.	.	.	.	.	.	.	.	430
		1397	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	H	S	G	K	L	Y	K	T	K	S	N	K	E	L	H	A	F	L	F	N	D	F	L	L	L	T	Y	L	V	R	Q	F	A	A	A	S	G	H	E	K	L	F	N	S	K	S	S	A	Q	F	R	M	Y	K	T	P	I	F
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.
Template Sequence		F	I	M	E	G	T	L	T	R	V	G	A	K	H	E	R	H	I	F	L	F	D	G	L	M	I	C	C	K	S	N	H	G	Q	.	.	.	.	.	.	.	.	P	R	L	P	G	A	S	N	A	E	Y	R	L	K	E	K	F	F
Template Known Secondary structure											T	T		S	S								T	T									T	T		.	.	.	.	.	.	.	.				T	T	S				S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.
Template SS confidence
		444	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.									.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.
		1457	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.		1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		L	N	E	V	L	V	K	L	P	T	D	P	S	G	D	E	P	V	F	H	I	S	H	.	I	D	R	V	Y	T	L	R	T	D	N	I	N	E	R	T	A	W	V	Q	K	I	K	G	A	S	E	Q
Query Conservation																									.
Alig confidence																									.
Template Conservation
Template Sequence		M	R	K	V	Q	I	N	D	K	D	D	T	N	E	Y	K	H	A	F	E	I	I	L	K	D	E	N	S	V	I	F	S	A	K	S	A	E	E	K	N	N	W	M	A	A	L	I	S	L	Q	Y	R
Template Known Secondary structure			S	S									S	S	S			S							T	T	S								S	S
Template Predicted Secondary structure
Template SS confidence
		496	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D