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Job DescriptionQ9Z0R6
Confidence97.74%DateWed Jul 10 14:14:37 BST 2013
Rank350Aligned Residues137
% Identity31%Templatec3evrA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:myosin light chain kinase, green fluorescent PDBTitle: crystal structure of calcium bound monomeric gcamp2
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30....... ..40.........50.... .....60.........70....
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Query Sequence  ITSEERTKHDKQFDNLKPSG. GYITGDQARTFFLQSGL. . PAPVLAEIWALSDLNKDGKM
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Template Sequence  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI
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   307..310.........320.........330.........340.........350.........360......
 
   75....80.........90.........100.........110.........120.........130....
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Query Sequence  DQQEFSIAMKLIKLKLQGQQLPVVLPPIMKQPPMFSPLISARFGMGSMPNLSIHQPLPPV
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Template Sequence  DFPEFLTMMARKMK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   367..370.........380
 
   135....140.........150.........160.........170.........180.........190....
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Query Sequence  APIATPLSSATSGTSIPPLMMPAPLVPSVSTSSLPNGTASLIQPLSIPYSSSTLPHASSY
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   195....200.........210.........220.........230.........240.........250....
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Query Sequence  SLMMGGFGGASIQKAQSLIDLGSSSSTSSTASLSGNSPKTGTSEWAVPQPSRLKYRQKFN
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DTDSEEEIREAFR
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   381........390...
 
   255....260.........270....... ..280.........290.........300.......
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Query Sequence  SLDKGMSGYLSGFQARNALLQSN. . LSQTQLATIWTLADIDGDGQLKAEEFILAM
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Template Sequence  VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM
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   394.....400.........410.........420.........430.........440........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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