Job Description Q9Z0R6 Confidence 100.00% Date Wed Jul 10 14:14:37 BST 2013 Rank 22 Aligned Residues 296 % Identity 20% Template c2rgnB_ PDB info PDB header:signaling protein complex Chain: B: PDB Molecule:rhoa/rac/cdc42 exchange factor; PDBTitle: crystal structure of p63rhogef complex with galpha-q and rhoa Resolution 3.50 Å

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		1165	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.			.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.
Predicted Secondary structure																																													.	.
Query SS confidence																																													.	.
Query Sequence		Q	P	T	E	R	K	R	Q	G	Y	I	H	E	L	I	Q	T	E	E	R	Y	M	D	D	D	L	Q	L	V	I	E	V	F	Q	K	R	M	A	E	E	G	F	L	.	.	T	E	A	D	M	A	L	I	F	V	N	W	K	E	L
Query Conservation																																													.	.
Alig confidence																									.																				.	.
Template Conservation																									.
Template Sequence		K	K	A	L	E	R	S	M	Y	V	L	S	E	L	V	E	T	E	K	M	Y	V	D	.	D	L	G	Q	I	V	E	G	Y	M	A	T	M	A	A	Q	G	V	P	E	S	L	R	G	R	D	R	I	V	F	G	N	I	Q	Q	I
Template Known Secondary structure		S																							.							T	T												S	S	S	G	G	G						T	T
Template Predicted Secondary structure																									.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		1223	.	.	.	.	.		.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		I	M	S	N	T	K	.	L	L	R	A	L	R	V	R	K	K	T	G	G	E	K	M	P	V	Q	M	I	G	D	I	L	A	A	E	L	S	H	M	Q	A	Y	I	R	F	C	S	C	Q	L	N	G	A	T	L	L	Q	Q	K	T
Query Conservation								.
Alig confidence								.															.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.
Template Sequence		Y	E	W	H	R	D	Y	F	L	Q	E	L	Q	R	C	L	K	D	P	D	W	.	.	.	.	.	.	L	A	Q	L	F	I	K	H	E	R	R	L	H	M	Y	V	V	Y	C	Q	N	K	P	K	S	E	H	V	V	S	E	F	G
Template Known Secondary structure								T										S		G	G	G	.	.	.	.	.	.								T	T	T	T	T									T	S								T	T	T	S
Template Predicted Secondary structure																							.	.	.	.	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.							.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		1282	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	D	T	D	F	K	E	F	L	K	K	L	A	S	D	P	R	C	K	G	M	P	L	S	S	F	L	L	K	P	M	Q	R	I	T	R	Y	P	L	L	I	R	S	I	L	E	N	T	P	Q	S	H	V	D	H	S	S	L	K
Query Conservation
Alig confidence			.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.
Template Sequence		D	.	.	.	.	.	.	.	S	Y	F	E	E	L	R	Q	Q	L	G	H	R	L	Q	L	N	D	L	L	I	K	P	V	Q	R	I	M	K	Y	Q	L	L	L	K	D	F	L	K	Y	Y	N	R	A	G	M	D	T	A	D	L	E
Template Known Secondary structure			.	.	.	.	.	.	.													S	S						T	T							T	S												T	S	S	S		S
Template Predicted Secondary structure			.	.	.	.	.	.	.
Template SS confidence
		268								.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		1342	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	L	E	R	A	E	E	L	C	S	Q	V	N	E	G	V	R	E	K	E	N	S	D	R	L	E	W	I	Q	A	H	V	Q	C	E	G	L	A	E	Q	L	I	F	N	S	L	T	N	C	L	G	P	R	K	L	L	H	S	G
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	A	V	E	V	M	C	F	V	P	K	R	C	N	D	M	M	T	L	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	G	F	E	G	K	L	T	A	Q	G	K	L	L	G	Q	D
Template Known Secondary structure																				G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		B	S			S		S	T	T	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.																						.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		1402	.	.	.	.	.	.	.	1410			.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		K	L	Y	K	T	K	S	N	K	.	.	E	L	H	A	F	L	F	N	D	F	L	L	L	T	Y	L	V	R	Q	F	A	A	A	S	G	H	E	K	L	F	N	S	K	S	S	A	Q	F	R	M	Y	K	T	P	I	F	L	N	E
Query Conservation											.	.
Alig confidence											.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	F	W	V	T	E	P	S	R	G	R	E	R	R	V	F	L	F	E	Q	I	I	I	F	S	E	A	L	G	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	V	Y	K	N	S	I	K	V	S	C
Template Known Secondary structure																				S	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									G	G	G
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390																			.	.	.	.	.	.	.	.	.	400	.
		1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.				.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		V	L	V	K	L	P	T	D	P	S	G	D	E	P	V	F	H	I	S	H	I	D	.	.	.	R	V	Y	T	L	R	T	D	N	I	N	E	R	T	A	W	V	Q	K	I	K	G	A	S	E	Q	Y	I	D	T	E	K
Query Conservation																								.	.	.
Alig confidence																								.	.	.
Template Conservation
Template Sequence		L	G	L	E	G	N	L	Q	G	D	P	C	R	F	A	L	T	S	R	G	P	E	G	G	I	Q	R	Y	V	L	Q	A	A	D	P	A	I	S	Q	A	W	I	K	H	V	A	Q	I	L	E	S	Q	R	D	F	L	N
Template Known Secondary structure							S	G	G	G		T	T									S	S	S										S	S
Template Predicted Secondary structure
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D