Return to main results Retrieve Phyre Job Id

Job DescriptionQ9Z0R6
Confidence98.65%DateWed Jul 10 14:14:37 BST 2013
Rank231Aligned Residues60
% Identity37%Templatec2k6dA_
PDB info PDB header:sh3 domain/ubiquitinChain: A: PDB Molecule:sh3 domain-containing kinase-binding protein 1; PDBTitle: cin85 sh3-c domain in complex with ubiquitin
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1088.1090.........1100.........1110.........1120... ......1130.........1140.....
Predicted Secondary structure 
























..












Query SS confidence 



































. .





















Query Sequence  HAVCQVIAMYDYMANNEDELNFSKGQLINVMNKDDP. . DWWQGETNGLTGLFPSNYVKMT
Query Conservation         




 
   




  

 
 

 
   .. 

 

  
  

 




   
Alig confidence 



































..





















Template Conservation 
      

 

      



  

 
 
         
      
  
 

  


 
Template Sequence  KSKDYCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVKLL
Template Known Secondary structure 

S

SS





SSB



TT



SSTTTTGGGS
Template Predicted Secondary structure 



























Template SS confidence 



























































   267..270.........280.........290.........300.........310.........320......
 
   1146.
Predicted Secondary structure 

Query SS confidence 

Query Sequence  TD
Query Conservation    
Alig confidence 

Template Conservation   
Template Sequence  PP
Template Known Secondary structure 

Template Predicted Secondary structure 

Template SS confidence 

   327.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D