Job Description Q9Z0R6 Confidence 100.00% Date Wed Jul 10 14:14:37 BST 2013 Rank 24 Aligned Residues 311 % Identity 20% Template c1lb1C_ PDB info PDB header:signaling protein Chain: C: PDB Molecule:guanine nucleotide exchange factor dbs; PDBTitle: crystal structure of the dbl and pleckstrin homology2 domains of dbs in complex with rhoa Resolution 2.81 Å

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		1165	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.							.	1210	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.
Query Sequence		Q	P	T	E	R	K	R	Q	G	Y	I	H	E	L	I	Q	T	E	E	R	Y	M	D	D	D	L	Q	L	V	I	E	V	F	Q	K	R	M	A	E	E	G	F	L	T	.	.	.	.	.	.	E	A	D	M	A	L	I	F	V	N
Query Conservation																																														.	.	.	.	.	.
Alig confidence																								.																						.	.	.	.	.	.
Template Conservation																								.
Template Sequence		E	S	L	A	I	L	R	R	H	V	M	N	E	L	L	D	T	E	R	A	Y	V	.	E	E	L	L	C	V	L	E	G	Y	A	A	E	M	D	N	P	L	M	A	H	L	I	S	T	G	L	Q	N	K	K	N	I	L	F	G	N
Template Known Secondary structure																								.										T	T	G	G	G	G		G	G	G	G	G	G	S							T						T	T
Template Predicted Secondary structure																								.
Template SS confidence
		627	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.		.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.
		1219	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	K	E	L	I	M	S	N	T	K	L	L	R	A	L	R	V	R	K	K	T	G	G	E	K	M	P	V	Q	M	I	G	D	I	L	A	A	E	L	S	H	M	Q	A	Y	I	R	F	C	S	C	Q	L	N	G	A	T	L	L	Q
Query Conservation
Alig confidence																				.	.	.	.	.
Template Conservation																				.	.	.	.	.
Template Sequence		M	E	E	I	Y	H	F	H	N	R	I	F	L	R	E	L	E	S	.	.	.	.	.	C	I	D	C	P	E	L	V	G	R	C	F	L	E	R	M	E	E	F	Q	I	Y	E	K	Y	C	Q	N	K	P	R	S	E	S	L	W	R
Template Known Secondary structure												T							T	.	.	.	.	.	T	S	S		G	G	G							T	T	T	T	G	G	G
Template Predicted Secondary structure																				.	.	.	.	.
Template SS confidence
		686	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.						.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740
		1279	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	T	D	E	D	T	D	F	K	E	F	L	K	K	L	A	S	D	P	R	C	K	G	M	P	L	S	S	F	L	L	K	P	M	Q	R	I	T	R	Y	P	L	L	I	R	S	I	L	E	N	T	P	Q	S	H	V	D	H	S
Query Conservation
Alig confidence				.														.	.	.	.	.																																	.
Template Conservation				.														.	.	.	.	.																																	.
Template Sequence		Q	C	.	S	D	C	P	F	F	Q	E	C	Q	K	K	L	.	.	.	.	.	D	H	K	L	S	L	D	S	Y	L	L	K	P	V	Q	R	I	T	K	Y	Q	L	L	L	K	E	M	L	K	Y	S	K	.	H	C	E	G	A	E
Template Known Secondary structure				.	T	T	S											.	.	.	.	.	T		S	S							T							T	T											T		T	.	T	S	T	T
Template Predicted Secondary structure				.														.	.	.	.	.																																	.
Template SS confidence
		741	.		.	.	.	.	.	.	.	750	.	.	.	.	.						.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.		.	.	790	.	.	.
		1339	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	K	L	A	L	E	R	A	E	E	L	C	S	Q	V	N	E	G	V	R	E	K	E	N	S	D	R	L	E	W	I	Q	A	H	V	Q	C	E	G	L	A	E	Q	L	I	F	N	S	L	T	N	C	L	G	P	R	K	L	L
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	Q	E	A	L	S	S	I	L	G	I	L	K	A	V	N	D	S	M	H	L	I	A	I	T	G	Y	D	G	N	L	G	D	L	G	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	M	Q	G	S	F	S	V
Template Known Secondary structure																								T	T					S	S		S	G	G	G				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		794	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.															.	.	.	.	.	.	.	.
		1399	1400	.	.	.	.	.	.	.	.	.	1410			.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		H	S	G	K	L	Y	K	T	K	S	N	K	.	.	E	L	H	A	F	L	F	N	D	F	L	L	L	T	Y	L	V	R	Q	F	A	A	A	S	G	H	E	K	L	F	N	S	K	S	S	A	Q	F	R	M	Y	K	T	P	I	F
Query Conservation														.	.
Alig confidence														.	.																										.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.
Template Sequence		W	T	D	H	K	K	G	L	A	R	F	K	P	M	Q	R	H	L	F	L	H	E	K	A	V	L	F	C	K	K	R	E	E	N	G	E	G	Y	E	.	.	.	.	.	.	.	.	.	K	A	P	S	Y	S	Y	K	Q	S	L	N
Template Known Secondary structure											S	S	S										S	S												S	S	S	G	G	.	.	.	.	.	.	.	.	.	G	S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.										.	880	.	.	.	.	.	.	.	.	.	890
		1457	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	E	V	L	V	K	L	P	T	D	P	S	G	D	E	P	V	F	H	I	S	H	I	D	R	V	Y	T	L	R	T	D	N	I	N	E	R	T	A	W	V	Q	K	I	K	G	A	S	E	Q	Y	I	D	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	T	A	V	G	I	T	E	N	V	K	G	D	T	K	K	F	E	I	W	Y	N	A	R	E	E	V	Y	I	I	Q	A	P	T	P	E	I	K	A	A	W	V	N	E	I	R	K	V	L	T	S	Q	L	Q	A
Template Known Secondary structure		G	G	G							B	T	T	B	T	T							G	G	G	T								S	S
Template Predicted Secondary structure
Template SS confidence
		897	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D