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Job DescriptionQ9ERV7
Confidence99.69%DateWed Jul 10 14:21:35 BST 2013
Rank77Aligned Residues241
% Identity25%Templatec1h6uA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:internalin h; PDBTitle: internalin h: crystal structure of fused n-terminal2 domains.
Resolution1.8 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   64.....70.........80.........90.........100.........110.........120...
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Query Sequence  PQLLQVEFLRLSTHEDPQLLDDTLAKVPWSLLRLRSLVLKGGQSRGALGACLHGTLTTLP
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Template Sequence  PALANAIKIAAGKSNVTDTVT. . . . . . QADLDGITTLSAFGTGVTTI. . . . . . . . . . . . .
Template Known Secondary structure  TT
SSTTS
......T


TTS




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   51........60.........70. ........80.........90.
 
   124.....130.........140.........150.........160........
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Query Sequence  AGLSDLACLAHLDLSFNRLETLPTCVPELHGLDALLLSHNHLSEL. . . . . . . . . . . . . . .
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Template Sequence  EGVQYLNNLIGLELKDNQITDLAP. LKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLT
Template Known Secondary structure  TTGGG
TT



SS




GG.GTT

S



S


S

GGGTT
TT


T
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   92.......100.........110..... ....120.........130.........140.........150
 
   169170.........180.........190.........200.........210.........220..
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Query Sequence  . . . . . . PEALGALPALTFLTVTHNRLERLPLTLGSLSTLQRLDLSENLLDTIPSEIGNLR
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Template Sequence  STQITDVTPLAGLSNLQVLYLDLNQITNI. SPLAGLTNLQYLSIGNAQVSDL. TPLANLS
Template Known Secondary structure  TS




GGGTT
TT



SS




.GGGGG
TT



SS




.GGGTT
T
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   151........160.........170......... 180.........190.........200. .......
 
   223......230.........240.........250.........260.........270.........280..
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Query Sequence  SLSELNLASNRLQSLPASLAGLRSLRLLVLHSNLLTSVPTGLVHLPLITRLDLRDNRLRD
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Template Sequence  KLTTLKADDNKISDI. SPLASLPNLIEVHLKNNQISDVSP. LANTSNLFIVTLTNQTITN
Template Known Secondary structure  T



SS




.GGGGG
TT


TTS


B
GG.GTT
TT


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   209210.........220... ......230.........240....... ..250.........260......
 
   283......290.........300.........310.........320.........330.
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Query Sequence  LPAELLDAPFVRLQGNPLGEASPAPPSPPDISQVPEMPRLLLTSDLDSF
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Template Sequence  QPVFYNNNLVVP. . . NVVKGPSGAPIAPATISDNGTYASPNLTWNLTSF
Template Known Secondary structure 



S...


B
TTS
B


SGGG
TT
SS
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   267..270........ .280.........290.........300.........310..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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