Return to main results Retrieve Phyre Job Id

Job DescriptionQ9ERV7
Confidence99.91%DateWed Jul 10 14:21:35 BST 2013
Rank28Aligned Residues189
% Identity41%Templatec4bsrB_
PDB info PDB header:signaling proteinChain: B: PDB Molecule:leucine-rich repeat-containing g-protein coupled receptor PDBTitle: structure of the ectodomain of lgr5 in complex with r-spondin-12 (fu1fu2) in p22121 crystal form
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   127..130.........140.........150.........160........ .170.........180.....
Predicted Secondary structure 






























.









Query SS confidence 









































.
















Query Sequence  SDLACLAHLDLSFNRLETLPTCVPELHGLDALLLSHNHLSEL. PEALGALPALTFLTVTH
Query Conservation    
  
  



 
 
  

  
  
  
  
 
  
 
  
.
  
  
  
  
 
  
Alig confidence 

























..













.
















Template Conservation       
  



 
 
  

  
   ..
  
 

 
 
    
     
  
  
 

 
Template Sequence  PDGRMLLRVDCSDLGLSELPSNLSVF. . TSYLDLSMNNISQLLPNPLPSLRFLEELRLAG
Template Known Secondary structure  SSTT


SS

SS

SS

TT..

SS

SSS
SS




TT


TT
Template Predicted Secondary structure 



















..





















Template SS confidence 



























































   42.......50.........60....... ..70.........80.........90.........
 
   186...190. ........200.........210.... .....220.........230.........240
Predicted Secondary structure 





.















.

















...
Query SS confidence 





.






















.

























. . .
Query Sequence  NRLERL. PLTLGSLSTLQRLDLSENLLDTI. PSEIGNLRSLSELNLASNRLQSLPAS. . .
Query Conservation 
 
  
.
  
  
  
  
 

 
 
  
.
  
  
  
  
 

 
 
  

  ...
Alig confidence 





.






















.

























...
Template Conservation 
 
  
 
     
  
  
 

 
 
          
  
                   
Template Sequence  NALTYIPKGAFTGLYSLKVLMLQNNQLRHVPTEALQNLRSLQSLRLDANHISYVPPSCFS
Template Known Secondary structure  S

S


TTTTSS
TT



SS

SB

TTTTTT
TT



SS


B

TTSST
Template Predicted Secondary structure 




















































Template SS confidence 



























































   100.........110.........120.........130.........140.........150.........
 
  
Predicted Secondary structure  ............................................................
Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation                                                              
Template Sequence  GLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHN
Template Known Secondary structure  T

S



SS


S

TT
TT



SS



TTTTTT
TT



S
Template Predicted Secondary structure 



























































Template SS confidence 



























































   160.........170.........180.........190.........200.........210.........
 
  
Predicted Secondary structure  ............................................................
Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation                                                              
Template Sequence  NRIHSLGKKCFDGLHSLETLDLNYNNLDEFPTAIRTLSNLKELGFHSNNIRSIPEKAFVG
Template Known Secondary structure  S



TTTT
S
SS



S


SS

GGGGG
TT



SS



TTSSTT
Template Predicted Secondary structure 



























































Template SS confidence 



























































   220.........230.........240.........250.........260.........270.........
 
  
Predicted Secondary structure  ............................................................
Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation                                                              
Template Sequence  NPSLITIHFYDNPIQFVGRSAFQHLPELRTLTLNGASQITEFPDLTGTANLESLTLTGAQ
Template Known Secondary structure 
TT


TTS



GGGG
S
TT



TT

S



TT



SSS
Template Predicted Secondary structure 



























































Template SS confidence 



























































   280.........290.........300.........310.........320.........330.........
 
   241.....
Predicted Secondary structure  ......................................................



Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .





Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LAGLRS
Query Conservation  ......................................................
  
  
Alig confidence  ......................................................





Template Conservation                                                              
Template Sequence  ISSLPQTVCNQLPNLQVLDLSYNLLEDLPSFSVCQKLQKIDLRHNEIYEIKVDTFQQLLS
Template Known Secondary structure 




TTSGGG
SS



SS


S



SS
TT



SS



SGGGTT
TT
Template Predicted Secondary structure 



























































Template SS confidence 



























































   340.........350.........360.........370.........380.........390.........
 
   247..250.........260 .........270.........280..... ....290.........300....
Predicted Secondary structure 










.
















.











Query SS confidence 













.
























.


















Query Sequence  LRLLVLHSNLLTSV. PTGLVHLPLITRLDLRDNRLRDLPA. ELLDAPFVRLQGNPLGEAS
Query Conservation 
  
 
  
 
  
.
  
  
  
  



 
 
  

 . 
  
  
 
 



    
Alig confidence 













.
























.


















Template Conservation 
  
 

 
 
    
     
  
  
 

 
 
  
    
  
  
 

 
      
Template Sequence  LRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFPITGLHGLTHLKLTGNHALQSL
Template Known Secondary structure 



SS



TTTTTT
TT



SS

SS


SS

S
S
TT
TT

S
Template Predicted Secondary structure 














































Template SS confidence 



























































   400.........410.........420.........430.........440.........450.........
 
   305....310.......
Predicted Secondary structure 










Query SS confidence 












Query Sequence  PAPPSPPDISQVP
Query Conservation             
 
Alig confidence 












Template Conservation 
    
  
  
 
Template Sequence  ISSENFPELKVIE
Template Known Secondary structure 

STT
TT

Template Predicted Secondary structure 












Template SS confidence 












   460.........470..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D