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Job DescriptionQ9ERV7
Confidence99.60%DateWed Jul 10 14:21:35 BST 2013
Rank90Aligned Residues113
% Identity26%Templatec2r9uC_
PDB info PDB header:immune systemChain: C: PDB Molecule:variable lymphocyte receptor; PDBTitle: crystal structure of lamprey variable lymphocyte receptor 29132 ectodomain
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   177..180.........190.........200.........210.... .....220.........230.....
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Query Sequence  ALTFLTVTHNRLERLPLTLGSLSTLQRLDLSENLLDTI. PSEIGNLRSLSELNLASNRLQ
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Template Sequence  DQTLVNCQNIRLASVPAGI. . PTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLT
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   2930.........40....... ..50.........60.........70.........80......
 
   236. ..240.........250.........260... ......270.........280.........290.
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Query Sequence  SL. PASLAGLRSLRLLVLHSNLLTSVPTG. LVHLPLITRLDLRDNRLRDLPAELLDAP
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Template Sequence  AIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDCECRDIMYLR
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   87..90.........100.........110.........120.........130.........140....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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