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Job DescriptionQ9ERV7
Confidence99.64%DateWed Jul 10 14:21:35 BST 2013
Rank85Aligned Residues125
% Identity26%Templatec2je0E_
PDB info PDB header:nuclear proteinChain: E: PDB Molecule:acidic leucine-rich nuclear phosphoprotein 32 family PDBTitle: crystal structure of pp32
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   152.......160...... ...170.........180.........190.........200.........
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Query Sequence  LHGLDALLLSHNHLS. . ELPEALGALPALTFLTVTHNRLERLPLTLGSLSTLQRLDLSEN
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Template Sequence  PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI. ANLPKLNKLKKLELSDN
Template Known Secondary structure  GGG
S
TT
B
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   16...20.........30.........40.........50....... ..60.........70....
 
   210.... .....220.........230......... 240.........250.........260. .
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Query Sequence  LLDTI. PSEIGNLRSLSELNLASNRLQSLPA. . SLAGLRSLRLLVLHSNLLTSVP. . . . T
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Template Sequence  RVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYREN
Template Known Secondary structure 


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SGGGGG
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GGGGSTT
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   75....80.........90.........100.........110.........120.........130....
 
   263......270.......
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Query Sequence  GLVHLPLITRLDLRD
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Template Sequence  VFKLLPQLTYLDGYD
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   135....140.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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