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Job DescriptionQ9ERV7
Confidence99.90%DateWed Jul 10 14:21:35 BST 2013
Rank31Aligned Residues164
% Identity22%Templatec3rg1B_
PDB info PDB header:immune systemChain: B: PDB Molecule:cd180 molecule; PDBTitle: crystal structure of the rp105/md-1 complex
Resolution2.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   133......140.........150.........160......... 170.........180.........190.
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Query Sequence  AHLDLSFNRLETLPTCVPELHGLDALLLSHNHLSELP. EALGALPALTFLTVTHNRLERL
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Template Sequence  RTYNCENLGLREIPDTLP. . NTTEVLEFSFNFLPTIQNTTFSRLINLIFLDLTRCQINWV
Template Known Secondary structure  T
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   35....40.........50.. .......60.........70.........80.........90..
 
   192.......200.........210....... ..220.........230....... ..240........
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Query Sequence  . PLTLGSLSTLQRLDLSENLLDTIPSE. IGNLRSLSELNLASNRLQSL. PASLAGLRSLR
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Template Sequence  HEDTFQSHHQLNTIVLTGNPLIFMAETSLTGPKFLKHLFLTQTGISNLEFIPVHNLENLE
Template Known Secondary structure 
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   93......100.........110.........120.........130.........140.........150..
 
   249250.........260. ........270.........280..... ....290........
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Query Sequence  LLVLHSNLLTSVP. TGLVHLPLITRLDLRDNRLRDLPA. . . . ELLDAPFVRLQGN
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Template Sequence  SLHLGSNHISSINLPENFPTQNLKVLDFQNNAIHYISRKDTNSLEQATNLSLNFN
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   153......160.........170.........180.........190.........200.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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