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Job DescriptionQ9ERV7
Confidence99.81%DateWed Jul 10 14:21:35 BST 2013
Rank52Aligned Residues146
% Identity27%Templatec4k5uD_
PDB info PDB header:immune systemChain: D: PDB Molecule:variable lymphocyte receptor; PDBTitle: recognition of the bg-h antigen by a lamprey variable lymphocyte2 receptor
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   133......140.........150.........160.........170. ........180.........190.
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Query Sequence  AHLDLSFNRLETLPTCVPELHGLDALLLSHNHLSELPEA. LGALPALTFLTVTHNRLERL
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Template Sequence  TEVNCAGKSLASVPAGIP. . TTTRVLYLNSNQITKLEPGVFDRLANLRELHLWGNQLVSL
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   12.......20......... 30.........40.........50.........60.........
 
   192.. .....200.........210.... .....220.........230....... ..240........
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Query Sequence  PLT. LGSLSTLQRLDLSENLLDTI. PSEIGNLRSLSELNLASNRLQSL. PASLAGLRSLR
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Template Sequence  PPGVFDNLANLEKLWLNSNQLTSLPAGLFDRLVNLEHLGLCCMKLTELPSGAFDKLTRLK
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   70.........80.........90.........100.........110.........120.........
 
   249250.........260. ........270.........280
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Query Sequence  LLVLHSNLLTSVP. TGLVHLPLITRLDLRDNRL
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Template Sequence  QLGLDQNQLKSIPDGAFARLPSLTHVWLHTNPW
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   130.........140.........150.........160..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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