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Job DescriptionQ9ERV7
Confidence99.73%DateWed Jul 10 14:21:35 BST 2013
Rank74Aligned Residues175
% Identity27%Templatec3m18A_
PDB info PDB header:immune systemChain: A: PDB Molecule:variable lymphocyte receptor a diversity region; PDBTitle: crystal structure of variable lymphocyte receptor vlra.r2.1 in complex2 with hen egg lysozyme
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   130.........140.........150.........160.........170. ........180........
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Query Sequence  ACLAHLDLSFNRLETLPTCVPELHGLDALLLSHNHLSELPEA. LGALPALTFLTVTHNRL
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Template Sequence  EGKKEVDCQGKSLDSVPSGI. . PADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQL
Template Known Secondary structure  TTTT
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   13......20.........30.. .......40.........50.........60.........70
 
   189190.... .....200.........210.... .....220.........230....... ..240.....
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Query Sequence  ERLPLT. LGSLSTLQRLDLSENLLDTI. PSEIGNLRSLSELNLASNRLQSL. PASLAGLR
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Template Sequence  QTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLT
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   71........80.........90.........100.........110.........120.........130
 
   246...250.........260. ........270.........280..... ....290.........300
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Query Sequence  SLRLLVLHSNLLTSVP. TGLVHLPLITRLDLRDNRLRDLPA. . . . ELLDAPFVRLQGNPL
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Template Sequence  KLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF
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   131........140.........150.........160.........170.........180.........190
 
   301.....
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Query Sequence  GEASPA
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Template Sequence  DCSRCE
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TTSTT
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   191.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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