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Job DescriptionQ9ERV7
Confidence99.47%DateWed Jul 10 14:21:35 BST 2013
Rank104Aligned Residues201
% Identity21%Templatec2uzyA_
PDB info PDB header:signaling protein/receptorChain: A: PDB Molecule:internalin b; PDBTitle: structure of the human receptor tyrosine kinase met in2 complex with the listeria monocytogenes invasion protein3 inlb: low resolution, crystal form ii
Resolution4.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   64.....70.........80.........90.........100.........110.........120...
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Query Sequence  PQLLQVEFLRLSTHEDPQLLDDTLAKVPWSLLRLRSLVLKGGQSRGALGACLHGTLTTLP
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Template Sequence  DAFAETIKDNLKKKSVTDAVT. . . . . . QNELNSIDQIIANNSDIKSVQG. . . . . . . . . . .
Template Known Secondary structure  TT
S
TTS
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TT...........
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   51........60.........70. ........80.........90...
 
   124.....130.........140.........150.........160.........170.........180...
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Query Sequence  AGLSDLACLAHLDLSFNRLETLPTCVPELHGLDALLLSHNHLSELPEALGALPALTFLTV
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Template Sequence  . . IQYLPNVTKLFLNGNKLTDIKP. LANLKNLGWLFLDENKVKDL. . SSLKDLKKLKSLS
Template Known Secondary structure  ..GGG
TT



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SG.GGG
TT


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G..GGGTT
TT

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   94.....100.........110..... ....120.........130..... ....140........
 
   184.....190.........200.........210.........220.........230.........240...
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Query Sequence  THNRLERLPLTLGSLSTLQRLDLSENLLDTIPSEIGNLRSLSELNLASNRLQSLPASLAG
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Template Sequence  LEHNGISDINGLVHLPQLESLYLGNNKITDI. TVLSRLTKLDTLSLEDNQISDI. VPLAG
Template Known Secondary structure 
TTS




GGGGG
TT
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.GGGGG
TT
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.GGGGG
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   149150.........160.........170......... 180.........190.........200. .....
 
   244.....250.........260.........270.........280.........
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Query Sequence  LRSLRLLVLHSNLLTSVPTGLVHLPLITRLDLRDNRLRDLPAELLD
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Template Sequence  LTKLQNLYLSKNHISDLRA. LAGLKNLDVLELFSQECLNKPINHQS
Template Known Secondary structure 
TT


TTS




GG.GGG
TT




B

B


B


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   207..210.........220..... ....230.........240.........250.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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