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Job DescriptionQ9ERV7
Confidence99.79%DateWed Jul 10 14:21:35 BST 2013
Rank66Aligned Residues176
% Identity36%Templatec4fmzA_
PDB info PDB header:cell adhesion, cell invasionChain: A: PDB Molecule:internalin; PDBTitle: crystal structure of an internalin (inlf) from listeria monocytogenes2 str. 4b f2365 at 1.91 a resolution
Resolution1.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   118.120...... ...130.........140.........150.........160.........170.
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Query Sequence  TLTTLPAGL. . . . . . SDLACLAHLDLSFNRLETLPTCVPELHGLDALLLSHNHLSELPEA
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Template Sequence  TLATLPAPINQIFPDADLAEGIRAVLQKASVTDVVT. QEELESITKLVVAGEKVASIQG.
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   37..40.........50.........60.........70.. .......80.........90....
 
   172.......180.........190.........200.........210.........220.........230.
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Query Sequence  LGALPALTFLTVTHNRLERLPLTLGSLSTLQRLDLSENLLDTIPSEIGNLRSLSELNLAS
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Template Sequence  IEYLTNLEYLNLNGNQITDISP. LSNLVKLTNLYIGTNKITDI. SALQNLTNLRELYLNE
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   95....100.........110...... ...120.........130...... ...140.........150..
 
   232.......240
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Query Sequence  NRLQSLPAS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  DNISDISPLANLTKXYSLNLGANHNLSDLSPLSNXTGLNYLTVTESKVKDVTPIANLTDL
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   153......160.........170.........180.........190.........200.........210..
 
  
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Template Sequence  YSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANXTRLNSLKIGNNKITDLSPL
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   213......220.........230.........240.........250.........260.........270..
 
   241........250.......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LAGLRSLRLLVLHSNLL
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Template Sequence  ANLSQLTWLEIGTNQISDINAVKDLTKLKXLNVGSNQISDISVLNNLSQLNSLFLNNNQL
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   273......280.........290.........300.........310.........320.........330..
 
   258.260. ........270.........280..... ....290........
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Query Sequence  TSVP. TGLVHLPLITRLDLRDNRLRDLPA. . ELLDAPFVRLQGN
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Template Sequence  GNEDXEVIGGLTNLTTLFLSQNHITDIRPLASLSKXDSADFA. N
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   333......340.........350.........360.........370.... .
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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