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Job DescriptionQ9ERV7
Confidence99.04%DateWed Jul 10 14:21:35 BST 2013
Rank121Aligned Residues139
% Identity23%Templatec1fo1A_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:nuclear rna export factor 1; PDBTitle: crystal structure of the rna-binding domain of the mrna2 export factor tap
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   135....140.........150.........160.........170.........180.........190....
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Query Sequence  LDLSFNRLETLPTCVPELHGLDALLLSHNHLSELPEALGALPALTFLTVTHNRLERLPLT
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Template Sequence  IELKPEQVEQLKLIMSKRYDGSQQVLDLKGLRSD. PDLVAQNIDVVLNRRSCMAATLRII
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   191........200.........210.........220.... .....230.........240.........
 
   195....200.........210..... ....220.........230......... 240.........250
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Query Sequence  LGSLSTLQRLDLSENLLDTIP. . . SEIGNLRSLSELNLASNRLQSLPA. SLAGLRSLRLL
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Template Sequence  EENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEEL
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TT



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GGGGTT
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GGGGGGGTTS

S
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   261........270.........280.........290.........300.........310.........320
 
   251....... .260... ......270....
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Query Sequence  VLHSNLLT. SVPTG. . . . . . . LVHLPLITRLD
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Template Sequence  WLDGNSLCDTFRDQSTYISAIRERFPKLLRLD
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TTSGGGGG
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   321........330.........340.........350..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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