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Job DescriptionQ9ERV7
Confidence99.41%DateWed Jul 10 14:21:35 BST 2013
Rank110Aligned Residues130
% Identity23%Templatec2ifgB_
PDB info PDB header:transferaseChain: B: PDB Molecule:high affinity nerve growth factor receptor; PDBTitle: structure of the extracellular segment of human trka in complex with2 nerve growth factor
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   156...160.........170.........180..... ....190.... .....200.........210...
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Query Sequence  DALLLSHNHLSELPEALGALPALTFLTVTH. NRLERLPLT. LGSLSTLQRLDLSENLLDT
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Template Sequence  SGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRF
Template Known Secondary structure  S

SS


TTTTTS
S
S

S



S



GGGG
S



S

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   46...50.........60.........70.........80.........90.........100.....
 
   214 .....220.........230........ .240.........250.........260. ........270
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Query Sequence  I. PSEIGNLRSLSELNLASNRLQSLP. ASLAGLRSLRLLVLHSNLLTSVP. TGLVHLPLI
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Template Sequence  VAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPLHCSCALRWLQRWEEE
Template Known Secondary structure 
TTGGGS
S




SS

S
GGGTSS





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GGGT
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   106...110.........120.........130.........140.........150.........160.....
 
   271........280.....
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Query Sequence  TRLDLRDNRLRDLPA
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Template Conservation                 
Template Sequence  GLGGVPEQKLQCHGQ
Template Known Secondary structure  T
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GGG

B
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   166...170.........180
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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