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Job DescriptionQ9ERV7
Confidence98.39%DateWed Jul 10 14:21:35 BST 2013
Rank126Aligned Residues210
% Identity15%Templatec4i6jB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:f-box/lrr-repeat protein 3; PDBTitle: a ubiquitin ligase-substrate complex
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   60.........70.........80.........90.........100.........110.........
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Query Sequence  SQQPPQLLQVEFLRLSTHEDPQLLDDTLAKVPWSLLRLRSLVLKGGQSRGALGACLHGTL
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Template Sequence  TVVFVNSKSLSSLKIDDTPVDDP. . SLKVLVANNSDTLKLLKMSSCPHVSPAGIL. . . . .
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   165....170.........180....... ..190.........200.........210.......
 
   120.........130.........140.... .....150.........160......
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Query Sequence  TTLPAGLSDLACLAHLDLSFNRLET. . . LPTCVPELHGLDALLLSHNHLS. . . . . . . . . .
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Template Sequence  . . . . CVADQCHGLRELALNYHLLSDELLLALSSEKHVRLEHLRIDVVSENPGQTHFHTIQ
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GGG

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   218.220.........230.........240.........250.........260.........270...
 
   167..170.........180.........190.........200.........210.. .......220...
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Query Sequence  . . ELPEALGALPALTFLTVTHNRLERLPLTLGSLSTLQRLDLSENLLD. TIPSEIGNLRS
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Template Sequence  KSSWDAFIRHSPKVNLVMYFFLYEEEFDPFFRYEIPATHLYFGRSVSKDVLGRVGMTCPR
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TT

TTSSSS




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TT
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   274.....280.........290.........300.........310.........320.........330...
 
   224.....230.........240. ........250........ .260....... ..270......
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Query Sequence  LSELNLASNRLQSLPASL. . . . AGLRSLRLLVLHSNLLT. . SVPTGLVHL. PLITRLDLR
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Template Sequence  LVELVVCANGLRPLDEELIRIAERCKNLSAIGLGECEVSCSAFVEFVKMCGGRLSQLSIM
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SGGG
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   334.....340.........350.........360.........370.........380.........390...
 
   277..280
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Query Sequence  DNRL
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Template Conservation      
Template Sequence  EEVL
Template Known Secondary structure  GGG
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   394...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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