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Job DescriptionQ9ERV7
Confidence99.63%DateWed Jul 10 14:21:35 BST 2013
Rank87Aligned Residues192
% Identity25%Templated2bnha_
SCOP infoLeucine-rich repeat, LRR (right-handed beta-alpha superhelix) RNI-like 28-residue LRR
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   72.......80.........90.........100.........110.........120.........130.
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Query Sequence  LRLSTHEDPQLLDDTLAKVPWSLLRLRSLVLKGGQSRGALGACLHGTLTTLPAGLSDLAC
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Template Sequence  LDIHCEQLSD. . . ARWTELLPLLQQYEVVRLDDCGLTE. . . . . . . EHCKDIGSALRANPS
Template Known Secondary structure 

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...TT
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   3......10.. .......20.........30....... ..40.........50..
 
   132.......140.... .....150.. .......160...... ...170.........180
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Query Sequence  LAHLDLSFNRLET. LPTCVPEL. . . . . HGLDALLLSHNHLS. . . . . ELPEALGALPALTF
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Template Conservation 
  



 
 
       
   
      
  
 

 
         
            
Template Sequence  LTELCLRTNELGDAGVHLVLQGLQSPTCKIQKLSLQNCSLTEAGCGVLPSTLRSLPTLRE
Template Known Secondary structure 



S


SSTT




TTS


GGGGGS
TT

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   53......60.........70.........80.........90.........100.........110..
 
  
Predicted Secondary structure  ............................................................
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation                                                              
Template Sequence  LHLSDNPLGDAGLRLLCEGLLDPQCHLEKLQLEYCRLTAASCEPLASVLRATRALKELTV
Template Known Secondary structure 

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STT




TT


B
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   113......120.........130.........140.........150.........160.........170..
 
  
Predicted Secondary structure  ............................................................
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation                                                              
Template Sequence  SNNDIGEAGARVLGQGLADSACQLETLRLENCGLTPANCKDLCGIVASQASLRELDLGSN
Template Known Secondary structure  TTSB
T

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TTS



TT



SS
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   173......180.........190.........200.........210.........220.........230..
 
  
Predicted Secondary structure  ............................................................
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation                                                              
Template Sequence  GLGDAGIAELCPGLLSPASRLKTLWLWECDITASGCRDLCRVLQAKETLKELSLAGNKLG
Template Known Secondary structure 

T
TT




TTS



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TTS

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   233......240.........250.........260.........270.........280.........290..
 
   181........190
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LTVTHNRLER. .
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Template Sequence  DEGARLLCESLLQPGCQLESLWVKSCSLTAACCQHVSLMLTQNKHLLELQLSSNKLGDSG
Template Known Secondary structure  TSTT




TTS

BGGG
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SSB
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   293......300.........310.........320.........330.........340.........350..
 
   191........200.........210... ......220.........230...... ...240
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Query Sequence  . . . . LPLTLGSLSTLQRLDLSENLLDT. . . . . IPSEIGNLRSLSELNLASNRLQS. LPAS
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Template Conservation                
  
 

 
 
       
   
     
  



 
 
   
   
Template Sequence  IQELCQALSQPGTTLRVLCLGDCEVTNSGCSSLASLLLANRSLRELDLSNNCVGDPGVLQ
Template Known Secondary structure  TTSSS




TTS




S


TTSS

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   353......360.........370.........380.........390.........400.........410..
 
   241... .....250........ .260....... ..270...
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Query Sequence  LAGL. . . . . RSLRLLVLHSNLLT. SVPTGLVHL. . . . PLITRL
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Template Conservation 
   
      
  
 

 
 

      
  
      
  
Template Sequence  LLGSLEQPGCALEQLVLYDTYWTEEVEDRLQALEGSKPGLRVI
Template Known Secondary structure  TSSS




TT




SS
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   413......420.........430.........440.........450.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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