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Job DescriptionQ9ERV7
Confidence98.61%DateWed Jul 10 14:21:35 BST 2013
Rank124Aligned Residues198
% Identity18%Templatec3sb4B_
PDB info PDB header:protein bindingChain: B: PDB Molecule:hypothetical leucine rich repeat protein; PDBTitle: crystal structure of a hypothetical leucine rich repeat protein2 (bt_1240) from bacteroides thetaiotaomicron vpi-5482 at 1.99 a3 resolution
Resolution1.99 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   87..90.........100.........110........ .120.... .....
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Query Sequence  LAKVPWSLLRLRSLVLKGGQSRGALGACLHGT. . . . . . . . LTTLPA. GLSDL. . . . . . . .
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Template Sequence  FRHLRDEFPSLKVLDISNAEIKXYSGKAGTYPNGKFYIYXANFVPAYAFSNVVNGVTKGK
Template Known Secondary structure  S
TT



SSSSSGGG


TT
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   61........70.........80.........90.........100.........110.........120
 
   130.........140....... ..150.........160.........170. ........180.......
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Query Sequence  ACLAHLDLSFNRLETLPT. CVPELHGLDALLLSHNHLSELPEA. LGALPALTFLTVTHNR
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Template Sequence  QTLEKVILSEK. IKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSD
Template Known Secondary structure  TT


TT.


TTTTTT
TT



SS


TTSS
TTT

TT
T
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   121........130. ........140.........150.........160.........170.........
 
   188.190........
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Query Sequence  LERLPLTLGSL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  AYRFKNRWEHFAFIEGEPLETTIQVGAXGKLEDEIXKAGLQPRDINFLTIEGKLDNADFK
Template Known Secondary structure  TSTTTTTS
S



TT

TT

GGG
S


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   180.........190.........200.........210.........220.........230.........
 
   199200.........210...... ...220.........230....... ..240.........250
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Query Sequence  . . . . . . STLQRLDLSENLLDTIPS. EIGNLRSLSELNLASNRLQSL. PASLAGLRSLRLL
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Template Sequence  LIRDYXPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLP. HNLKTIGQRVFSNCGRLAGT
Template Known Secondary structure 
TT


TTB



TTTTTT
TT



.TT


TTTTTT
TT

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   240.........250.........260.........270........ .280.........290........
 
   251........260... ......270.........280......
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Query Sequence  VLHSNLLTSVPTG. LVHLPLITRLDLRDNRLRDLPAE
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Template Sequence  LELPASVTAIEFGAFXGCDNLRYVLATGDKITTLGDE
Template Known Secondary structure 
TT


TTTTTT
TT
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TT
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   299300.........310.........320.........330.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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