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Job DescriptionQ9ERV7
Confidence99.69%DateWed Jul 10 14:21:35 BST 2013
Rank76Aligned Residues233
% Identity19%Templated2astb2
SCOP infoLeucine-rich repeat, LRR (right-handed beta-alpha superhelix) RNI-like Cyclin A/CDK2-associated p19, Skp2
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   70.........80.........90.........100.........110.........120.........
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Query Sequence  EFLRLSTHEDPQLLDDTLAKVPWSLLRLRSLVLKGGQSRGALGACLHGTLTTLPAGLSDL
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Template Sequence  QTLDLTGKNL. . . HPDVTGRLLSQ. . GVIAFRCPRSFMDQ. . . . . . . . . . . PLAEHFSPF
Template Known Secondary structure  S
TT
B
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T..T
S
TT

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S



B
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   2138.2140....... ..2150........ .2160.........2170.. .......2180.
 
   130.........140.... .....150.........160....... ..170.........180......
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Query Sequence  ACLAHLDLSFNRLET. . LPTCVPELHGLDALLLSHNHLSE. LPEALGALPALTFLTVTHN
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Template Sequence  . RVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGC
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TT

TTB


S
TT
B

TT
TT
S
TT
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   2182.......2190.........2200.........2210.........2220.........2230.........2240
 
   187.. 190.........200.........210....
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Query Sequence  RLE. . . RLPLTLGSLSTLQRLDLSENLLDTI. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  SGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKS
Template Known Secondary structure  BS


TT





TT

S
TT



S
GGGS
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   2241........2250.........2260.........2270.........2280.........2290.........2300
 
   215....220.........230.. .... ...240.........250.... .... .260........
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Query Sequence  . . PSEIGNLRSLSELNLASN. RLQS. LPASLAGLRSLRLLVLHS. NLLT. SVPTGLVHLP
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Template Sequence  DLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIP
Template Known Secondary structure 
TT
S
TT
TT

GGGGGGGGG
TT


TT
TT

GGGGGGGGG
T
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   2301........2310.........2320.........2330.........2340.........2350.........2360
 
   269270........ .280.........290.........300.........310.........
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Query Sequence  LITRLDLRDN. RLRDLPAELLDAPFVRLQGNPLGEASPAPPSPPDISQVPEM
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Template Sequence  TLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGI
Template Known Secondary structure  T


TTSS
TT
STTSS


S

TT
SS
SSTT


BTTB
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   2361........2370.........2380.........2390.........2400.........2410..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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