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Job DescriptionQ9ERV7
Confidence99.89%DateWed Jul 10 14:21:35 BST 2013
Rank33Aligned Residues168
% Identity32%Templatec2xotA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:amphoterin-induced protein 1; PDBTitle: crystal structure of neuronal leucine rich repeat protein amigo-1
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   131........140.........150.........160.........170 .........180........
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Query Sequence  CLAHLDLSFNRLETLPTCVPELHGLDALLLSHNHLSELPE. . ALGALPALTFLTVTHNRL
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Template Sequence  ASNILSCSKQQLPNVPQSLP. . SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHL
Template Known Secondary structure  TT

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   41........50.........60 .........70.........80.........90........
 
   189190.... .....200.........210.... .....220.........230....... ..240.....
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Query Sequence  ERLPLT. LGSLSTLQRLDLSENLLDTI. PSEIGNLRSLSELNLASNRLQSL. PASLAGLR
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Template Sequence  NFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMA
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TTTTTT
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   99100.........110.........120.........130.........140.........150........
 
   246...250.........260.........270.........280....... ..290.........
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Query Sequence  SLRLLVLHSNLLTSVPTGLVHLPLITRLDLRDNRLRDLPAEL. . . . . . LDAPFVRLQGNP
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Template Sequence  QLQKLYLSQNQISRFPVELIKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNP
Template Known Secondary structure  T



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GGGT

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   159160.........170.........180.........190.........200.........210........
 
   300
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Query Sequence  L
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Template Sequence  L
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   223
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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