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Job DescriptionQ9ERV7
Confidence99.68%DateWed Jul 10 14:21:35 BST 2013
Rank80Aligned Residues126
% Identity27%Templatec2o6rA_
PDB info PDB header:immune systemChain: A: PDB Molecule:variable lymphocyte receptor b; PDBTitle: structural diversity of the hagfish variable lymphocyte2 receptors b61
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   154.....160.........170.........180.........190.... .....200.........210..
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Query Sequence  GLDALLLSHNHLSELPEALGALPALTFLTVTHNRLERLPLT. LGSLSTLQRLDLSENLLD
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Template Sequence  SGTEIRCNSKGLTSVPTGI. . PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQ
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   31........40......... 50.........60.........70.........80........
 
   213. .....220.........230....... ..240.........250.........260 .........
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Query Sequence  TI. PSEIGNLRSLSELNLASNRLQSL. PASLAGLRSLRLLVLHSNLLTSV. PTGLVHLPL
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Template Sequence  SLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTS
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   8990.........100.........110.........120.........130.........140........
 
   270.........280.
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Query Sequence  ITRLDLRDNRLR
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Template Sequence  LQKIWLHTNPWD
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   149150.........160
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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