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Job DescriptionQ9ERV7
Confidence99.92%DateWed Jul 10 14:21:35 BST 2013
Rank17Aligned Residues217
% Identity38%Templatec4kt1A_
PDB info PDB header:hormone receptor/cell adhesionChain: A: PDB Molecule:leucine-rich repeat-containing g-protein coupled receptor PDBTitle: complex of r-spondin 1 with lgr4 extracellular domain
Resolution2.50 Å
Model Dimensions (Å)X:67.045 Y:90.861 Z:60.762

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   121........130.........140.........150.........160......... 170.........
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Query Sequence  TLPAGLSDLACLAHLDLSFNRLETLPTCVPELHGLDALLLSHNHLSELP. EALGALPALT
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Template Sequence  PLCAAPCSCDGDRRVDCSGKGLTAVPEGLSAF. . TQALDISMNNITQLPEDAFKNFPFLE
Template Known Secondary structure 



TT

STT

SS

SS


S

TT..



SS



TTTTTT
TT
S
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   27..30.........40.........50........ .60.........70.........80....
 
   180.........190. ........200.........210.... .....220.........230.......
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Query Sequence  FLTVTHNRLERL. PLTLGSLSTLQRLDLSENLLDTI. PSEIGNLRSLSELNLASNRLQSL
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Template Conservation   
 

 
 
  
 
     
  
  
 

 
 
                           
Template Sequence  ELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSV
Template Known Secondary structure 
TTS



TTTTTT
TT



SS


B

TTTTTT
TT



SS


B
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   85....90.........100.........110.........120.........130.........140....
 
   238.240
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Query Sequence  PAS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Conservation                                                              
Template Sequence  PEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLV
Template Known Secondary structure 
TTTTTT
TT



SS


S

TT
TT



SS



TTTTTT
TT

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   145....150.........160.........170.........180.........190.........200....
 
  
Predicted Secondary structure  ............................................................
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation                                                              
Template Sequence  VLHLHNNKIRSLSQHCFDGLDNLETLDLNYNNLGEFPQAIKALPSLKELGFHSNSISVIP
Template Known Secondary structure 

SS



TTTTTT
TT



SS


S

GGGGG
TT



SS



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   205....210.........220.........230.........240.........250.........260....
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation                                                              
Template Sequence  DGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQQFPNLTGTVHLESL
Template Known Secondary structure  TTTTTT
TT



SS



TTTT
S
TT



TT

S



TT



S
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   265....270.........280.........290.........300.........310.........320....
 
  
Predicted Secondary structure  ............................................................
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation                                                              
Template Sequence  TLTGTKISSIPNNLCQEQKMLRTLDLSYNNIRDLPSFNGCHALEEISLQRNQIYQIKEGT
Template Known Secondary structure  SS





TT
SS



SS


S



TT
TT



SS



TTT
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   325....330.........340.........350.........360.........370.........380....
 
   241........250.........260 .........270.........280..... ....290........
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Query Sequence  LAGLRSLRLLVLHSNLLTSV. PTGLVHLPLITRLDLRDNRLRDLPA. ELLDAPFVRLQGN
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Template Conservation        
  
 

 
 
          
  
  
 

 
 
  
    
  
  
 
  
Template Sequence  FQGLISLRILDLSRNLIHEIHSRAFATLGPITNLDVSFNELTSFPTEGLNGLNQLKLVGN
Template Known Secondary structure  TTT
TT



SS



TTTTTT
SS



SS

S



TT
TT
S
TT
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   385....390.........400.........410.........420.........430.........440....
 
   299300.........310.........320.........330.........
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Query Sequence  PLGEASPAPPSPPDISQVPEMPRLLLTSDLDSFLVTPHGCS
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Template Conservation             
  
  
 
  
  
               
Template Sequence  FKLKEALAAKDFVNLRSLSVPYAYQCCAFWGCIHCTPSTGH
Template Known Secondary structure  TT





GGGGTT


SSGGGGTTTS





TT
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   445....450.........460.........470.........480.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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