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Job DescriptionQ9ERV7
Confidence99.55%DateWed Jul 10 14:21:35 BST 2013
Rank99Aligned Residues147
% Identity24%Templatec3g3aA_
PDB info PDB header:hydrolase/immune systemChain: A: PDB Molecule:variable lymphocyte receptor vlrb.2d; PDBTitle: structure of a lamprey variable lymphocyte receptor in2 complex with a protein antigen
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   132.......140.........150.........160.........170. ........180.........
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Query Sequence  LAHLDLSFNRLETLPTCVPELHGLDALLLSHNHLSELPEA. LGALPALTFLTVTHNRLE.
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Template Sequence  GTTVDCSGKSLASVPTGIP. . TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTV
Template Known Secondary structure  TT

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   10.........20........ .30.........40.........50.........60.......
 
   190.........200.........210....... ..220.........230.........240........
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Query Sequence  RLPLTLGSLSTLQRLDLSENLLDTIPSE. IGNLRSLSELNLASNRLQSLPASLAGLRSLR
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Template Sequence  LPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDILYLSRW.
Template Known Secondary structure 

TTTTTT
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TTBGGG.
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   68.70.........80.........90.........100.........110.........120......
 
   249250.........260.........270.........280.....
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Query Sequence  LLVLHSNLLTSVPTGLVHLPLITRLDLRDNRLRDLPA
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Template Sequence  . . . ISQHPGL. VFGYLNLDPDSARCSGTNTPVRAVTE
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TTT.
SSSB
TT
SBBTTT

BGGG

G
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   127..130... ......140.........150.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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