Return to main results Retrieve Phyre Job Id

Job DescriptionQ9ERV7
Confidence99.24%DateWed Jul 10 14:21:35 BST 2013
Rank116Aligned Residues194
% Identity21%Templated1fs2a2
SCOP infoLeucine-rich repeat, LRR (right-handed beta-alpha superhelix) RNI-like Cyclin A/CDK2-associated p19, Skp2
Resolution2.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   65....70.........80.........90.........100.........110.........120....
Predicted Secondary structure 










































Query SS confidence 



























































Query Sequence  QLLQVEFLRLSTHEDPQLLDDTLAKVPWSLLRLRSLVLKGGQSRGALGACLHGTLTTLPA
Query Conservation   
  

 
 

 
 
       
  
   
  
  
 
  
 
         
 
  

 
Alig confidence 
















...
























...........



Template Conservation   
  
  



   
  ...  
         
  
 
       ...........    
Template Sequence  DEFRVQHMDLSNSVIEV. . . STLHGILSQCSKLQNLSLEGLRLSD. . . . . . . . . . . PIVN
Template Known Secondary structure 
GGGSSTTSS


...TT
S

S
TT
B

...........
Template Predicted Secondary structure 













...











...........



Template SS confidence 



























































   153......160......... 170.........180.........190.... ....
 
   125....130.........140.... .....150.........160.........170. ......
Predicted Secondary structure 













...

















....



Query SS confidence 



















. . .


























. . . .





Query Sequence  GLSDLACLAHLDLSFNRLET. . . LPTCVPELHGLDALLLSHNHLSELPEA. . . . LGALPA
Query Conservation   
  
  
  



 
 
  ...

  
  
  
  
 
  
 
  

  ....
  
  
Alig confidence 



















...


























....





Template Conservation         
  
 
                    
  
 
                     
Template Sequence  TLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSET
Template Known Secondary structure  TT
TT


TT
BS


TT





TT

S
TT
Template Predicted Secondary structure 



























































Template SS confidence 



























































   237..240.........250.........260.........270.........280.........290......
 
   178.180.........190 .........200.........210.. .......220.........230.
Predicted Secondary structure 









....














..












Query SS confidence 












. . . .





















. .


















Query Sequence  LTFLTVTHNRLER. . . . LPLTLGSLSTLQRLDLSENLLD. . TIPSEIGNLRSLSELNLAS
Query Conservation 
  
 
  
 
  ....

  
  
  
  
 

 
 
 .. 

  
  
  
  
 

 
Alig confidence 












....





















..


















Template Conservation                             
  
                     
  
 
  
Template Sequence  ITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSR
Template Known Secondary structure 





TTT


TT


TT
TT

GGGTT
TT


TT
Template Predicted Secondary structure 














































Template SS confidence 



























































   297..300.........310.........320.........330.........340.........350......
 
   232.... ...240.........250........ .260.........270..
Predicted Secondary structure  .




.














.








Query SS confidence  .




.





















.













Query Sequence  . NRLQS. LPASLAGLRSLRLLVLHSNLLT. SVPTGLVHLPLITR
Query Conservation  .
 
  .

  
  
  
  
 
  
 
 . 

  
  
  
  
Alig confidence  .




.





















.













Template Conservation     

      
     
  
 

 
     
  
    
 
 
Template Sequence  CYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQI
Template Known Secondary structure 
TTS
GGGGGGGGG
TT


TTSS

TTS
Template Predicted Secondary structure 






















Template SS confidence 











































   357..360.........370.........380.........390.........400
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D