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Job DescriptionQ9ERV7
Confidence99.87%DateWed Jul 10 14:21:35 BST 2013
Rank38Aligned Residues188
% Identity29%Templatec2ft3B_
PDB info PDB header:structural protein, signaling proteinChain: B: PDB Molecule:biglycan; PDBTitle: crystal structure of the biglycan dimer core protein
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   131........140.........150.........160.........170. ........180.........
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Query Sequence  CLAHLDLSFNRLETLPTCVPELHGLDALLLSHNHLSELPEA. LGALPALTFLTVTHNRLE
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Template Sequence  HLRVVQCSDLGLKAVPKEIS. . PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKIS
Template Known Secondary structure  TT

SS

SSS
S


..TT



SS



TTTTTT
TT



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   34.....40.........50... ......60.........70.........80.........90.
 
   190.... .....200.........210........
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Query Sequence  RLPLT. LGSLSTLQRLDLSENLLDTIPSEI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Conservation                                                              
Template Sequence  KIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVELRIHDNRIRKVPKGVFSGLRNMNC
Template Known Secondary structure 
GGGSTT
TT



SS


S

SS

TT



S






STTSSS
SS

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   92.......100.........110.........120.........130.........140.........150.
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  IEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIELE
Template Known Secondary structure 

SS


GGGS
TTSS
S


S

B

SS

SS

SSS
TT
S

B

SS





TT
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   152.......160.........170.........180.........190.........200.........210.
 
   219220.........230....... ..240.........250.........260.........270.....
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Query Sequence  . . GNLRSLSELNLASNRLQSL. PASLAGLRSLRLLVLHSNLLTSVPTGLVHLPLITRLDL
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Template Sequence  DLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVPAGLPDLKLLQVVYL
Template Known Secondary structure  TTTT
TT
S

SS





TTGGGS
TT



SS


B

TTGGG
TT


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   212.......220.........230.........240.........250.........260.........270.
 
   276...280....... ..290.........300.........310.........320
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Query Sequence  RDNRLRDLPAEL. . . . . . . . . . LDAPFVRLQGNPLGEASPAPPSPPDISQVPEMP
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Template Sequence  HTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQ
Template Known Secondary structure  TTS


B

TTSSS
TT

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S

SSSS
GGGS
GGGGSS

SSTT
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   272.......280.........290.........300.........310.........320......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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