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Job DescriptionQ9ERV7
Confidence99.84%DateWed Jul 10 14:21:35 BST 2013
Rank44Aligned Residues155
% Identity23%Templatec2z63A_
PDB info PDB header:immune systemChain: A: PDB Molecule:toll-like receptor 4, variable lymphocyte receptor b; PDBTitle: crystal structure of the tv8 hybrid of human tlr4 and hagfish vlrb.61
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   131........140.........150.........160......... 170.........180.........
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Query Sequence  CLAHLDLSFNRLETLPTCVPELHGLDALLLSHNHLSELP. EALGALPALTFLTVTHNRLE
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Template Sequence  PNITYQCMELNFYKIPDNL. . PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ
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   34.....40.........50.. .......60.........70.........80.........90.
 
   190. ........200.........210....... ..220.........230......... 240......
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Query Sequence  RL. PLTLGSLSTLQRLDLSENLLDTIPSE. IGNLRSLSELNLASNRLQSLPA. SLAGLRS
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Template Sequence  TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKT
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   92.......100.........110.........120.........130.........140.........150.
 
   247..250........ .260.........270.........280.......
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Query Sequence  LRLLVLHSNLLT. . SVPTGLVHLPLITRLDLRDNRLRDLPAEL
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Template Sequence  LKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD
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   152.......160.........170.........180.........190....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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