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Job DescriptionQ9ERV7
Confidence99.80%DateWed Jul 10 14:21:35 BST 2013
Rank57Aligned Residues146
% Identity29%Templatec3e6jA_
PDB info PDB header:immune systemChain: A: PDB Molecule:variable lymphocyte receptor diversity region; PDBTitle: crystal structure of variable lymphocyte receptor (vlr) rbc36 in2 complex with h-trisaccharide
Resolution1.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   133......140.........150.........160........ .170.........180.........190.
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Query Sequence  AHLDLSFNRLETLPTCVPELHGLDALLLSHNHLSEL. PEALGALPALTFLTVTHNRLERL
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Template Sequence  TTVDCRSKRHASVPAGIP. . TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGAL
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   31........40........ .50.........60.........70.........80........
 
   192.. .....200.........210.... .....220.........230.........240.........
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Query Sequence  PLT. LGSLSTLQRLDLSENLLDTI. PSEIGNLRSLSELNLASNRLQSLPASLAGLRSLRL
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Template Sequence  PVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTH
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   8990.........100.........110.........120.........130.........140........
 
   250.........260 .........270.........280
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Query Sequence  LVLHSNLLTSV. PTGLVHLPLITRLDLRDNRL
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Template Sequence  LALDQNQLKSIPHGAFDRLSSLTHAYLFGNPW
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   149150.........160.........170.........180
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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