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Job DescriptionQ9ERV7
Confidence97.00%DateWed Jul 10 14:21:35 BST 2013
Rank139Aligned Residues226
% Identity10%Templatec4h09C_
PDB info PDB header:protein bindingChain: C: PDB Molecule:hypothetical leucine rich repeat protein; PDBTitle: crystal structure of a hypothetical leucine rich repeat protein2 (eubven_01088) from eubacterium ventriosum atcc 27560 at 2.50 a3 resolution
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   53......60.........70.........80.........90.........100.........110..
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Query Sequence  HRLQYLCSQQPPQLLQVEFLRLSTHEDPQLLDDTLAKVPWSLLRLRSLVLKGGQSRGALG
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Template Sequence  DYTKIANIPWYKDRDRISEVRVNSG. ITSIGEANF. . . . NSCYNXTKVTVASTVTSIGDG
Template Known Secondary structure 

SSGGGSTTGGGGGG
S
TT.
TTTT....TT
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TT
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   63......70.........80....... ..90...... ...100.........110.......
 
   113......120........
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Query Sequence  ACLHGTLTTLPAGLSD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  AFADTKLQSYTGXERVKKFGDYVFQGTDLDDFEFPGATTEIGNYIFYNSSVKRIVIPKSV
Template Known Secondary structure  TTTTS



TT


TTTTTT


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TT


TTTTTT




TT
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   118.120.........130.........140.........150.........160.........170.......
 
   129130.........140..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LACLAHLDLSFNRL
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Template Sequence  TTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVK
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S
TTTT
TT


TT
SSTTTTSS

TT


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TT

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   178.180.........190.........200.........210.........220.........230.......
 
   143......150.........160.........170.........180.........190.........200..
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Query Sequence  ETLPTCVPELHGLDALLLSHNHLSELPEALGALPALTFLTVTHNRLERLPLTLGSLSTLQ
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Template Sequence  TVTAYGFSYGKNLKKITITSGVTTLGDGAFYGXKALDEIAIPKNVTSIGSFLLQNCTALK
Template Known Secondary structure 
TTTTTT
SS
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TT


TTTTTT
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TTTTTT
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   238.240.........250.........260.........270.........280.........290.......
 
   203......210.........220.........230......... 240.........250.........260.
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Query Sequence  RLDLSENLLDTIPSEIGNLRSLSELNLASNRLQSLPA. SLAGLRSLRLLVLHSNLLTSVP
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Template Sequence  TLNFYAKVKTVPYLLCSGCSNLTKVVXDNSAIETLEPRVFXDCVKLSSVTLPTA. LKTIQ
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S
TTTTTT
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TTTTTT
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   298.300.........310.........320.........330.........340.........350. .....
 
   262. ......270.........280.....
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Query Sequence  TG. LVHLPLITRLDLRDNRLRDLPA
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Template Sequence  VYAFKNCKALSTISYPKS. ITLIES
Template Known Secondary structure  TTTTTT
TT






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T
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   357..360.........370.... .....380
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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