Return to main results Retrieve Phyre Job Id

Job DescriptionQ9ERV7
Confidence99.80%DateWed Jul 10 14:21:35 BST 2013
Rank60Aligned Residues194
% Identity34%Templatec2o6qA_
PDB info PDB header:immune systemChain: A: PDB Molecule:variable lymphocyte receptor a; PDBTitle: structural diversity of the hagfish variable lymphocyte2 receptors a29
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   95....100.........110.........120.........130.........140........ .150...
Predicted Secondary structure 









































.


Query SS confidence 





















































.




Query Sequence  LRLRSLVLKGGQSRGALGACLHGTLTTLPAGLSDLACLAHLDLSFNRLETLPTC. VPELH
Query Conservation    
  
 
  
 
         
 
  

  
  
  
  



 
 
  

  .
  
 
Alig confidence 











............







..



















.




Template Conservation    
  



 
 ............
  

  
..   
  
 

 
 
  
    
  
 
Template Sequence  NNKNSVDCSSKK. . . . . . . . . . . . LTAIPSNI. . PADTKKLDLQSNKLSSLPSKAFHRLT
Template Known Secondary structure  TTTT
TTS
............
SS

S

..
TT
S

SS

S


TTSSSS
T
Template Predicted Secondary structure 








............







..
















Template SS confidence 



























































   38.40......... 50....... ..60.........70.........80...
 
   154.....160.........170. ........180.........190.... .....200.........210.
Predicted Secondary structure 












.















.











Query SS confidence 

















.






















.
















Query Sequence  GLDALLLSHNHLSELPEA. LGALPALTFLTVTHNRLERLPLT. LGSLSTLQRLDLSENLL
Query Conservation   
  
 
  
 
  

  .
  
  
  
 
  
 
  

  .
  
  
  
 

 
 
Alig confidence 

















.






















.
















Template Conservation   
  
 

 
 
             
                                  
Template Sequence  KLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQL
Template Known Secondary structure  T



SS

S


TTTTSS
TT



SS





TTTTTT
SS



SS

Template Predicted Secondary structure 























































Template SS confidence 



























































   84.....90.........100.........110.........120.........130.........140...
 
   212.. .....220.........230....... ..240.........250.........260 ........
Predicted Secondary structure 


.
















.















.



Query SS confidence 


.






















.






















.







Query Sequence  DTI. PSEIGNLRSLSELNLASNRLQSL. PASLAGLRSLRLLVLHSNLLTSV. PTGLVHLP
Query Conservation    
.
  
  
  
  
 

 
 
  
.
  
  
  
  
 
  
 
  
.
  
  
 
Alig confidence 


.






















.






















.







Template Conservation                                                              
Template Sequence  KSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLT
Template Known Secondary structure 



TTTTTT
TT



SS





TTTTTT
TT



SS

S


TTTTTT
T
Template Predicted Secondary structure 























































Template SS confidence 



























































   144.....150.........160.........170.........180.........190.........200...
 
   269270.........280..... ....290.........300..
Predicted Secondary structure 












....









Query SS confidence 
















. . . .
















Query Sequence  LITRLDLRDNRLRDLPA. . . . ELLDAPFVRLQGNPLGE
Query Conservation   
  



 
 
  

 .... 
  
  
 
 



  
Alig confidence 
















....
















Template Conservation   
  
 
  
 
       
  
  
  
 
  

  
Template Sequence  ELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC
Template Known Secondary structure  T



SS

S


TTTTTT
TT



SS
B

Template Predicted Secondary structure 




























Template SS confidence 





































   204.....210.........220.........230.........240.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D