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Job DescriptionQ9ERV7
Confidence98.39%DateWed Jul 10 14:21:35 BST 2013
Rank125Aligned Residues210
% Identity16%Templatec4fs7A_
PDB info PDB header:protein bindingChain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a hypothetical leucine rich repeat protein2 (bacova_04585) from bacteroides ovatus atcc 8483 at 1.19 a resolution
Resolution1.19 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   65....70.........80.........90.........100.........110.........120....
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Query Sequence  QLLQVEFLRLSTHEDPQLLDDTLAKVPWSLLRLRSLVLKGGQSRGALGACLHGTLTTLPA
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Template Sequence  NIPPVVTYKDNKYDVVSIGYAAF. . . . QGCRKVTEIKIPST. . . . . . . . . . . . . VREIGE
Template Known Secondary structure 

STT
TTTT....TT
TT

TT.............


T
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   65....70.........80....... ..90.........100. ......
 
   125....130.........140.........150.........160.........170.........180
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Query Sequence  . GLSDLACLAHLDLSFNRLETLPTCVPELHGLDALLLSHNHLSELPEALGALPALTF. . .
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Template Sequence  FAFENCSKLEIINIPDSVKXIGRCTFSGCYALKSILLPLXLKSIGVEAFKGCDFKEITIP
Template Known Secondary structure  TTTTT
TT




TT


TTTTTT
TT






TT


TTTTTT


S

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   108.110.........120.........130.........140.........150.........160.......
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  EGVTVIGDEAFATCESLEYVSLPDSXETLHNGLFSGCGKLKSIKLPRNLKIIRDYCFAEC
Template Known Secondary structure  TT


TTTTTT
TT



TT


TTTTTT
TT

B



TT


TTTTTT
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   168.170.........180.........190.........200.........210.........220.......
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  ILLENXEFPNSLYYLGDFALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLRI
Template Known Secondary structure  TT

B



TT


TTTTTT




TT


SSTTTT
SS



TT
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   228.230.........240.........250.........260.........270.........280.......
 
   181........190.........200.........210.........220.........
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Query Sequence  . . . . . . . . . . . LTVTHNRLERLPLTLGSLSTLQRLDLSENLLDTIPSEIGNLRSLSELNL
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Template Sequence  GGSLFYNCSGLKKVIYGSVIVPEKTFYGCSSLTEVKLLDSVKFIGEEAFESCTSLVSIDL
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S
TTTT
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TTTTTT
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TT


TTTTTT
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   288.290.........300.........310.........320.........330.........340.......
 
   230....... ..240.........250.........260... ......270.........280.......
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Query Sequence  ASNRLQSL. PASLAGLRSLRLLVLHSNLLTSVPTG. LVHLPLITRLDLRDNRLRDLPAEL
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Template Sequence  PYL. VEEIGKRSFRGCTSLSNINFPLS. LRKIGANAFQGCINLKKVELPKR. LEQYRYDF
Template Known Secondary structure 
TT.


TTTTTT
TT




TT.


TTTBTT
TT

GG.GGGGGGGB
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   348.350 .........360.........370... ......380.........390...... ...400....
 
   288.290....
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Query Sequence  LDAPFVR
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Template Sequence  EDTTKFK
Template Known Secondary structure 
TT
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   405....410.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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