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Job DescriptionQ9ERV7
Confidence99.87%DateWed Jul 10 14:21:35 BST 2013
Rank36Aligned Residues152
% Identity24%Templatec3fxiA_
PDB info PDB header:immune systemChain: A: PDB Molecule:toll-like receptor 4; PDBTitle: crystal structure of the human tlr4-human md-2-e.coli lps ra complex
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   133......140.........150.........160......... 170.........180.........190.
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Query Sequence  AHLDLSFNRLETLPTCVPELHGLDALLLSHNHLSELP. EALGALPALTFLTVTHNRLERL
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Template Sequence  ITYQCMELNFYKIPDNL. . PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTI
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   36...40.........50.. .......60.........70.........80.........90...
 
   192.......200.........210....... ..220.........230.........240 ........
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Query Sequence  . PLTLGSLSTLQRLDLSENLLDTIPSE. IGNLRSLSELNLASNRLQSLPAS. LAGLRSLR
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Template Sequence  EDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLK
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TTSSTT
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   94.....100.........110.........120.........130.........140.........150...
 
   249250......... 260.........270.........280......
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Query Sequence  LLVLHSNLLTS. . VPTGLVHLPLITRLDLRDNRLRDLPAE
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Template Sequence  ELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT
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GGGTT
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   154.....160.........170.........180.........190...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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