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Job DescriptionQ9ERV7
Confidence99.44%DateWed Jul 10 14:21:35 BST 2013
Rank106Aligned Residues164
% Identity24%Templated2ca6a1
SCOP infoLeucine-rich repeat, LRR (right-handed beta-alpha superhelix) RNI-like Rna1p (RanGAP1), N-terminal domain
Resolution2.2

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   130.........140.........150.........160...... ...170.........180....
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Query Sequence  ACLAHLDLSFNRLETLPTCVPELHGLDALLLSHNHLS. . . . . ELPEALGALPALTFLTVT
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Template Sequence  KSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFS
Template Known Secondary structure 


SS

STTS
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TTS
TTTT
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   910.........20.........30.........40.........50.........60........
 
   185....190.. .......200.........210........
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Query Sequence  HNRLERLP. . . . . . . . . . . LTLGSLSTLQRLDLSENLLDTIPSEI. . . . . . . . . . . . . . .
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Template Sequence  DIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLY
Template Known Secondary structure  S

TTS
GGGSTT
TT



S



TTT
TT

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   6970.........80.........90.........100.........110.........120........
 
   219220.........230.........240
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . GNLRSLSELNLASNRLQSLPAS. . . . . . . . . . .
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Template Sequence  LHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRL
Template Known Secondary structure 

SS

T






SS

TGGG
TT
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   129130.........140.........150.........160.........170.........180........
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Conservation                                                              
Template Sequence  LHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRE
Template Known Secondary structure 



SS


TTGGG
TT



SS

GGG
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   189190.........200.........210.........220.........230.........240........
 
   241........250......... 260.........270...
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . LAGLRSLRLLVLHSNLLTS. . . . . . VPTGLVHLPLITRL
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Template Conservation                             
  
 

 
 
       
   
      
  
Template Sequence  LGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFL
Template Known Secondary structure 
TT



T
SS





SS

B
TT

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   249250.........260.........270.........280.........290.........300........
 
   274.....280.........290...
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Query Sequence  DLRDNRLRDLPAELLDAPFV
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Template Sequence  ELNGNRFSEEDDVVDEIREV
Template Known Secondary structure 
TTSBS
TTS
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   309310.........320........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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