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Job DescriptionQ9ERV7
Confidence99.53%DateWed Jul 10 14:21:35 BST 2013
Rank100Aligned Residues197
% Identity23%Templated1h6ua2
SCOP infoLeucine-rich repeat, LRR (right-handed beta-alpha superhelix) L domain-like Internalin LRR domain
Resolution1.8

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   60.........70.........80.........90.........100.........110.........
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Query Sequence  SQQPPQLLQVEFLRLSTHEDPQLLDDTLAKVPWSLLRLRSLVLKGGQSRGALGACLHGTL
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Template Sequence  NVIFPDPALANAIKIAAGKSNVTDTVTQADLD. . . . GITTLSAFGTGVTTI. . . . . . . . .
Template Known Secondary structure 

STT
SSTTS
....T


TTS




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   45....50.........60.........70...... ...80.........90.
 
   120.........130.........140.........150.........160........
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Query Sequence  TTLPAGLSDLACLAHLDLSFNRLETLPTCVPELHGLDALLLSHNHLSEL. . . . . . . . . . .
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Template Sequence  . . . . EGVQYLNNLIGLELKDNQITDLAP. LKNLTKITELELSGNPLKNVSAIAGLQSIKT
Template Known Secondary structure  ....TTGGG
TT



SS




GG.GTT

S



S


S

GGGTT
TT

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   92.......100.........110..... ....120.........130.........140......
 
   169170.........180.........190.........200.........210........
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Query Sequence  . . . . . . . . . . PEALGALPALTFLTVTHNRLERLPLTLGSLSTLQRLDLSENLLDTIPSEI
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Template Conservation                                   .                      .   
Template Sequence  LDLTSTQITDVTPLAGLSNLQVLYLDLNQITNI. SPLAGLTNLQYLSIGNAQVSDL. TPL
Template Known Secondary structure 
TTS




GGGTT
TT



SS




.GGGGG
TT



SS




.GGG
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   147..150.........160.........170......... 180.........190.........200. ...
 
   219220.........230.........240.........250.........260.........270........
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Query Sequence  GNLRSLSELNLASNRLQSLPASLAGLRSLRLLVLHSNLLTSVPTGLVHLPLITRLDLRDN
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Template Sequence  ANLSKLTTLKADDNKISDI. SPLASLPNLIEVHLKNNQISDVSP. LANTSNLFIVTLT. N
Template Known Secondary structure  TT
TT



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.GGGGG
TT


TTS




GG.GTT
TT



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   205....210.........220... ......230.........240....... ..250.........260 .
 
   279
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Query Sequence  R
Query Conservation   
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Template Sequence  Q
Template Known Secondary structure 
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   262
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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