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Job DescriptionQ9ERV7
Confidence99.68%DateWed Jul 10 14:21:35 BST 2013
Rank79Aligned Residues218
% Identity15%Templatec2ra8A_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:uncharacterized protein q64v53_bacfr; PDBTitle: crystal structure of the q64v53_bacfr protein from bacteroides2 fragilis. northeast structural genomics consortium target bfr43
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   62.......70.........80.........90... ......100.........110........
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Query Sequence  QPPQLLQVEFLRLSTHEDPQLLDDTLAKVPWS. . . LLRLRSLVLKGGQSRGALGACLHGT
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Template Sequence  KDKKLPSLKQITIGWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIE. .
Template Known Secondary structure 
TTGGG
S


SSS

STTTT
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TTT

GGG
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   102.......110.........120.........130.........140.........150.........
 
   119120.........130.........140.........150.........160....... ..170.... .
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Query Sequence  LTTLPAGLSDLACLAHLDLSFNRLETLPTCVPELHGLDALLLSHNHLSE. LPEALGA. . L
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Template Sequence  QVDLSPVLDAXPLLNNLKIKGT. . NNLSIGKKPRPNLKSLEIISGGLPDSVVEDILGSDL
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B
T
TT



..BT
B

S
B
TT
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SB

SB
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   161........170.........180.. .......190.........200.........210........
 
   176...180....... ..190.........200.........210.. .......220.
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Query Sequence  PALTFLTVTHNR. . . . . . . . . . LERLPLTLGSLSTLQRLDLSENLLD. . . . TIPSEIGNL
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Template Sequence  PNLEKLVLYVGVEDYGFDGDXNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEXFLESDIL
Template Known Secondary structure  TT


B
GGGT

S
GGGTGGGS
TTT
TT

S
TT
SSG
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   219220.........230.........240.........250.........260.........270........
 
   222.......230...... ...240.........250........ .260.... .....270....
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Query Sequence  RSLSELNLASNRLQS. . . . . LPASLAGLRSLRLLVLHSNLLT. SVPTGL. VHLPLITRLD
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Template Sequence  PQLETXDISAGVLTDEGARLLLDHVDKIKHLKFINXKYNYLSDEXKKELQKSLP. . XKID
Template Known Secondary structure  GG
S

SS

BTTTT
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SBB



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   279280.........290.........300.........310.........320.........330.. ....
 
   275....280 .....
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Query Sequence  LRDNRL. RDLPA
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Template Sequence  VSDSQEYPXITE
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SB






G
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   337..340........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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