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Job DescriptionQ9ERV7
Confidence99.87%DateWed Jul 10 14:21:35 BST 2013
Rank37Aligned Residues178
% Identity26%Templatec3j0aB_
PDB info PDB header:immune systemChain: B: PDB Molecule:toll-like receptor 5; PDBTitle: homology model of human toll-like receptor 5 fitted into an electron2 microscopy single particle reconstruction
Resolution26.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   105....110.........120.........130.........140..... ....150.........160...
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Query Sequence  GQSRGALGACLHGTLTTLPAGLSDLACLAHLDLSFNRLETL. PTCVPELHGLDALLLSHN
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Template Sequence  CSFDGRIAFYRFCNLTQVPQ. . . VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQ
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   24.....30.........40... ......50.........60.........70.........80
 
   164.. ...170. ........180.........190. ........200.........210.... ...
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Query Sequence  HLS. ELPEA. LGALPALTFLTVTHNRLERL. PLTLGSLSTLQRLDLSENLLDTI. . . PSE
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Template Sequence  YTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGY
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SSTTSS
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B

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   81........90.........100.........110.........120.........130.........140
 
   218.220.........230....... ..240.........250.........260... ......270..
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Query Sequence  IGNLRSLSELNLASNRLQSL. . PASLAGLRSLRLLVLHSNLLTSVPTG. . . LVHLPLITR
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Template Sequence  FRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSF
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GGGGT
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   141........150.........160.........170.........180.........190.........200
 
   273......280.....
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Query Sequence  LDLRDNRLRDLPA
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Template Sequence  FSLAANSLYSRVS
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SBS




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   201........210...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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