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Job DescriptionQ9ERV7
Confidence99.98%DateWed Jul 10 14:21:35 BST 2013
Rank4Aligned Residues223
% Identity16%Templatec4ecnA_
PDB info PDB header:unknown functionChain: A: PDB Molecule:leucine-rich repeat protein; PDBTitle: crystal structure of a leucine-rich repeat protein (bt_0210) from2 bacteroides thetaiotaomicron vpi-5482 at 2.80 a resolution
Resolution2.80 Å
Model Dimensions (Å)X:56.994 Y:59.421 Z:37.091

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   63......70.........80.........90.........100.........110.........120..
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Query Sequence  PPQLLQVEFLRLSTHEDPQLLDDTLAKVPWSLLRLRSLVLKGGQSRGALGACLHGTLTTL
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Template Sequence  FGTNVKLTDLKLDYNQIEEIPEDFC. . . . AFTDQVEGLGFSHNKLKYIPNIF. . . . . . . .
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   619620.........630.........640... ......650.........660......
 
   123......130.........140.........150... ......160.........170. ....
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Query Sequence  PAGLSDLACLAHLDLSFNRLETLPTCVPELH. . . . . . GLDALLLSHNHLSELPEA. LGAL
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Template Sequence  . . NAKSVYVXGSVDFSYNKIGSEGRNISCSXDDYKGINASTVTLSYNEIQKFPTELFATG
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TT
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TTTTSSS
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   667..670.........680.........690.........700.........710.........720....
 
   176...180.........190.... .....200.........210......... 220.....
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Query Sequence  PALTFLTVTHNRLERLPLT. . . . . . . . LGSLSTLQRLDLSENLLDTIPSEIG. . NLRSLS
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Template Sequence  SPISTIILSNNLXTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLTSLSDDFRATTLPYLS
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S

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GGGSTTT
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   725....730.........740.........750.........760.........770.........780....
 
   226...230.........240.........250...... ...260.........270........
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Query Sequence  ELNLASNRLQSLPASLAGLRSLRLLVLHSNL. . . . . . . LTSVPTGLVHLPLITRLDLRDN
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Template Sequence  NXDVSYNCFSSFPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSN
Template Known Secondary structure 

SS

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GGGG
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B
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   785....790.........800.........810.........820.........830.........840....
 
   279280....... ..290.........
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Query Sequence  RLRDLPAEL. LDAPFVRLQGNP
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Template Sequence  DIRKVDEKLTPQLYILDIADNP
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   845....850.........860......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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