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Job DescriptionQ9ERV7
Confidence99.90%DateWed Jul 10 14:21:35 BST 2013
Rank30Aligned Residues193
% Identity22%Templated2omza2
SCOP infoLeucine-rich repeat, LRR (right-handed beta-alpha superhelix) L domain-like Internalin LRR domain
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   63......70.........80.........90.........100.........110.........120..
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Query Sequence  PPQLLQVEFLRLSTHEDPQLLDDTLAKVPWSLLRLRSLVLKGGQSRGALGACLHGTLTTL
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Template Conservation     
  
  
 
  
    

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Template Sequence  TALAEKMKTVLGKTNVTDTVSQ. . . . . . . TDLDQVTTLQADRLG. . . . . . . . . . . . IKSI
Template Known Secondary structure  TT
SSTTS
.......TT



SS
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   51........60.........70.. .......80....... ..90.
 
   123......130.........140.........150.........160.........170.........180
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Query Sequence  PAGLSDLACLAHLDLSFNRLETLPTCVPELHGLDALLLSHNHLSELPEALGALPALTF. .
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Template Conservation   . 
  
  
  
 

 
 
  
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Template Sequence  D. GVEYLNNLTQINFSNNQLTDITP. LKNLTKLVDILMNNNQIADITPLANLTNLTGLTL
Template Known Secondary structure  T.TGGG
TT



SS




GG.GTT
TT



SS




GGGTT
TT


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   92 .......100.........110..... ....120.........130.........140.........
 
  
Predicted Secondary structure  ............................................................
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation                                                              
Template Sequence  FNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTL
Template Known Secondary structure 
SS




GGGTT
TT
S


GGGTT
TT
SS



GGGTT
TT
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   150.........160.........170.........180.........190.........200.........
 
  
Predicted Secondary structure  ............................................................
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation                                                              
Template Sequence  ERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTL
Template Known Secondary structure 


SS




GGGGG
TT
S

SS




GGGGG
TT



SS




GGG
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   210.........220.........230.........240.........250.........260.........
 
   181........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LTVTHNRLE
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Template Conservation                                                              
Template Sequence  ASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQL
Template Known Secondary structure  GG
TT
S

SS




GGGTT
TT
S

SS




GGGTT
TT
S

SS

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   270.........280.........290.........300.........310.........320.........
 
   190.........200.........210.........220.........230.........240.........
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Query Sequence  RLPLTLGSLSTLQRLDLSENLLDTIPSEIGNLRSLSELNLASNRLQSLPASLAGLRSLRL
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Template Sequence  EDISPISNLKNLTYLTLYFNNISDISP. VSSLTKLQRLFFANNKVSDVS. SLANLTNINW
Template Known Secondary structure  S

GGGGG
TT
S

SS

S

GG.GGG
TT



SS




G.GGGG
TT

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   330.........340.........350...... ...360.........370....... ..380.......
 
   250.........260.........270.........
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Query Sequence  LVLHSNLLTSVPTGLVHLPLITRLDLRDNR
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Template Conservation 
 

 
 
  
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Template Sequence  LSAGHNQISDLTP. LANLTRITQLGLNDQA
Template Known Secondary structure 

SS




GG.GTT
TT
S




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   388.390.........400 .........410......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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