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Job DescriptionQ9ERV7
Confidence99.92%DateWed Jul 10 14:21:35 BST 2013
Rank20Aligned Residues197
% Identity47%Templatec4bstB_
PDB info PDB header:signaling proteinChain: B: PDB Molecule:leucine-rich repeat-containing g-protein coupled receptor PDBTitle: structure of the ectodomain of lgr5 in complex with r-spondin-12 (fu1fu2) in p6122 crystal form
Resolution4.30 Å
Model Dimensions (Å)X:45.311 Y:97.075 Z:55.513

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   62.......70.........80.........90.........100.........110.........120.
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Query Sequence  QPPQLLQVEFLRLSTHEDPQLLDDTLAKVPWSLLRLRSLVLKGGQSRGALGACLHGTLTT
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Template Sequence  CEPDGRMLLRVDCSDLGLSELPS. . . . . . . NLSVFTSYLDLSMNNISQ. . . . . . . . . . . L
Template Known Secondary structure 
SSS


SS

SS

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SS

SS


S...........S
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   40.........50.........60.. .......70.........80 .
 
   122.......130.........140..... ....150.........160.........170.....
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Query Sequence  LPAGLSDLACLAHLDLSFNRLETL. PTCVPELHGLDALLLSHNHLSELPEALGAL. . . . .
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Template Sequence  LPNPLPSLRFLEELRLAGNALTYIPKGAFTGLYSLKVLMLQNNQLRHVPTEALQNLRSLQ
Template Known Secondary structure 
SS




TT


TTS

S


SGGGTT
TT



S


SBS
TTTTSS
TT

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   82.......90.........100.........110.........120.........130.........140.
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Conservation                                                              
Template Sequence  SLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIHHI
Template Known Secondary structure 

SS


B

TTSSTT
TT



SS


S

TT
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   142.......150.........160.........170.........180.........190.........200.
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  PDYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPTAIRTLSNLKE
Template Known Secondary structure 
TTTTSS
TT



SS



TTSTTS
SS



S



S

GGGGG
TT

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   202.......210.........220.........230.........240.........250.........260.
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  LGFHSNNIRSIPEKAFVGNPSLITIHFYDNPIQFVGRSAFQHLPELRTLTLNGASQITEF
Template Known Secondary structure 

SS



SSSSTT

S



SS



SSTT
S
TT

B

B


TT

S
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   262.......270.........280.........290.........300.........310.........320.
 
   176...180...
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PALTFLTV
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Template Sequence  PDLTGTANLESLTLTGAQISSLPQTVCNQLPNLQVLDLSYNLLEDLPSFSVCQKLQKIDL
Template Known Secondary structure 


TT



SB
SS





TTGGGG

S



SS


S



SSS
S


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   322.......330.........340.........350.........360.........370.........380.
 
   184..... 190.........200.........210.... .....220.........230.........240.
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Query Sequence  THNRLE. RLPLTLGSLSTLQRLDLSENLLDTI. PSEIGNLRSLSELNLASNRLQSLPASL
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Template Sequence  RHNEIYEIKVDTFQQLLSLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFP. . I
Template Known Secondary structure 
SS



SGGG
S
TT



SS



GGGGTT
TT



SS


S

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   382.......390.........400.........410.........420.........430........ .
 
   242.......250.........260.........270........
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Query Sequence  AGLRSLRLLVLHSNLLTSVPTGLVHLPLITRLDLRDN
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Template Conservation    
  
  
 

 
 
    
    
  
  
 

  
Template Sequence  TGLHGLTHLKLTGNHALQSLISSENFPELKVIEMPYA
Template Known Secondary structure  TTT
S
S
TT
TT

S


STTS
S


SS
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   440.........450.........460.........470......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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