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Job DescriptionQ9ERV7
Confidence99.78%DateWed Jul 10 14:21:35 BST 2013
Rank69Aligned Residues173
% Identity40%Templated1jl5a_
SCOP infoLeucine-rich repeat, LRR (right-handed beta-alpha superhelix) L domain-like Leucine rich effector protein YopM
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   96...100.........110.........120.........130.........140.........150.....
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Query Sequence  RLRSLVLKGGQSRGALGACLHGTLTTLPAGLSDLACLAHLDLSFNRLETLPTCVPELHGL
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Template Sequence  QAHELELNNLG. . . . . . . . . . . . LSSLPEL. . . PPHLESLVASCNSLTELP. . . ELPQSL
Template Known Secondary structure  T
S
TTS
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S


S
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TT
S

SS

SS

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TT
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   1072.......1080.. ....... 1090.........1100....... ..1110...
 
   156...160.........170.........180.........190.........200.......
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Query Sequence  DALLLSHNHLSELPEALGALPALTFLTVTHNRLERLPLTLGSLSTLQRLDLS. . . . . . . .
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Template Sequence  KSLLVDNNNLKALSD. . . LPPLLEYLGVSNNQLEKL. PELQNSSFLKIIDVDNNSLKKLP
Template Known Secondary structure 


SS

S


S...

TT



SS

SS
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TT
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SS

S


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   1114.....1120........ .1130.........1140...... ...1150.........1160.........
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation                                                              
Template Sequence  DLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEE
Template Known Secondary structure 


TT



SS

SS



TT
TT



SS

SS




TT



SS

SS
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   1170.........1180.........1190.........1200.........1210.........1220.........
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation                                                              
Template Sequence  LPELQNLPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIF
Template Known Secondary structure 



TT
TT



SS

SS

S

TT



SS

S





TT



SS

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   1230.........1240.........1250.........1260.........1270.........1280.........
 
   208.210.........220.........230.........240.........250....
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Query Sequence  . . . . . . . . . . . . . ENLLDTIPSEIGNLRSLSELNLASNRLQSLPASLAGLRSLRLLVLHS
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Template Sequence  SGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPAL. . . PPRLERLIASF
Template Known Secondary structure  SS


TT



SS

S



TT



SS

S




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S
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   1290.........1300.........1310.........1320.........1330..... ....1340......
 
   255....260.........270.........280.........290......
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Query Sequence  NLLTSVPTGLVHLPLITRLDLRDNRLRDLPAELLDAPFVRLQ
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Template Sequence  NHLAEVP. . . ELPQNLKQLHVEYNPLREFPDIPESVEDLRMN
Template Known Secondary structure  S

S


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TT



SS

SS




TT



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   1347..1350... ......1360.........1370.........1380.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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