Job Description Q62077 Confidence 98.67% Date Tue Jul 30 13:20:18 BST 2013 Rank 173 Aligned Residues 126 % Identity 17% Template c3sibA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:ure3-bp sequence specific dna binding protein; PDBTitle: crystal structure of ure3-binding protein, wild-type Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	K	Q	F	Y	S	V	D	R	N	R	E	D	R	I	S	A	K	D	L	K	N	M	L	S	Q	V	N	Y	R	V	P	N	M	R	F	L	R	E	R	L	T	D	L	E	Q	R	S	G	D	I	T	Y	G	Q	F	A	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Y	Q	W	F	M	G	V	D	R	D	R	S	G	T	L	E	I	N	E	L	M	M	G	Q	F	P	G	G	I	R	L	S	P	Q	T	A	L	R	M	M	R	I	F	D	T	D	F	N	G	H	I	S	F	Y	E	F	M	A	M
Template Known Secondary structure											T	T			S	S	B											G	G	G																	T	T		S	S		B
Template Predicted Secondary structure
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	S	L	M	Y	S	A	Q	K	T	M	D	L	P	F	L	E	T	N	A	L	R	T	G	E	R	P	E	H	C	Q	V	S	L	S	E	F	Q	Q	F	L	L	E	Y	Q	G	E	L	W	A	V	D	R	L	Q	V	Q	E	F
Query Conservation
Alig confidence						.	.	.	.	.											.	.	.	.	.	.																							.	.	.
Template Conservation						.	.	.	.	.											.	.	.	.	.	.																							.	.	.
Template Sequence		Y	K	F	M	.	.	.	.	.	E	L	A	Y	N	L	F	V	M	N	.	.	.	.	.	.	D	R	N	R	S	G	T	L	E	P	H	E	I	L	P	A	L	Q	Q	L	G	F	.	.	.	Y	I	N	Q	R	T	S	L	L	L
Template Known Secondary structure						.	.	.	.	.											.	.	.	.	.	.		T	T			S				G	G	G									T		.	.	.
Template Predicted Secondary structure						.	.	.	.	.											.	.	.	.	.	.																							.	.	.
Template SS confidence
		113	.	.	.						.	.	.	120	.	.	.	.	.	.							.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.				.	150	.	.	.	.	.	.	.	.
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	S	F	L	R	D	P	L	R	E	I	E	E	P	Y	F	F	L	D	E	L	V	T	F	L
Query Conservation
Alig confidence						.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.
Template Sequence		H	R	L	F	.	.	.	.	.	.	A	R	G	M	A	F	C	D	L	N	C	W	I	A	I	C
Template Known Secondary structure						.	.	.	.	.	.	S	T	T		S	S
Template Predicted Secondary structure						.	.	.	.	.	.
Template SS confidence
		159	160	.	.							.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D