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Job DescriptionQ62077
Confidence97.91%DateTue Jul 30 13:20:18 BST 2013
Rank239Aligned Residues92
% Identity21%Templatec3no3A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:glycerophosphodiester phosphodiesterase; PDBTitle: crystal structure of a glycerophosphodiester phosphodiesterase2 (bdi_0402) from parabacteroides distasonis atcc 8503 at 1.89 a3 resolution
Resolution1.89 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   341........350.........360.........370.........380....
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Query Sequence  GDQFSSESSLEAYARCLRMGCRCIELDCWDGPDGMPVIYHGHTL. . . . . . . . . . . . . . . .
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Template Sequence  KTEGSAQNSIRSLERASEIGAYGSEFDVHLTADNVLVVYHDNDIQGKHIQSCTYDELKDL
Template Known Secondary structure  SSTT

TTSTT
S
TTS

SSSTTGGGS
TT
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   35....40.........50.........60.........70.........80.........90....
 
   385....390.........400.........410.........420.........430......
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Query Sequence  . . . . . TTKIKFSDVLHTIKEHAFVASEYPVILSIEDHCSIAQQRNMAQHFRKVLGDT
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Template Sequence  QLSNGEKLPTLEQYLKRAKKL. . . . KNIRLIFELKSHDTPERNRDAARLSVQXVKRX
Template Known Secondary structure  B
TTS
B

B
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   95....100.........110..... ....120.........130.........140.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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