Job Description Q62077 Confidence 99.32% Date Tue Jul 30 13:20:18 BST 2013 Rank 61 Aligned Residues 121 % Identity 20% Template c3m7fB_ PDB info PDB header:signaling protein/ligase Chain: B: PDB Molecule:e3 ubiquitin-protein ligase nedd4; PDBTitle: crystal structure of the nedd4 c2/grb10 sh2 complex Resolution 2.00 Å

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		1089	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	C	I	E	V	L	G	A	R	H	L	P	K	N	G	R	G	I	V	C	P	F	V	E	I	E	V	A	G	A	E	Y	D	S	T	K	Q	K	T	E	F	V	V	D	N	G	L	N	P	V	W	P	A	K	P	F	H	F	Q
Query Conservation
Alig confidence															.	.																																							.
Template Conservation															.	.																																							.
Template Sequence		V	V	R	V	K	V	I	A	G	I	G	L	A	.	.	I	L	G	A	S	D	P	Y	V	R	V	T	L	Y	D	P	M	S	G	I	L	T	S	V	Q	T	K	T	I	K	K	S	L	N	P	K	W	N	.	E	E	I	L	F	R
Template Known Secondary structure												S			.	.																T	T	T												S	S		S	S					.
Template Predicted Secondary structure															.	.																																							.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.
		1149	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.				.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.
Predicted Secondary structure																																								.	.	.
Query SS confidence																																								.	.	.
Query Sequence		I	S	N	P	E	F	A	F	L	R	F	V	V	Y	E	E	D	M	F	S	D	Q	N	F	L	A	Q	A	T	F	P	V	K	G	L	K	T	G	.	.	.	Y	R	A	V	P	L	K	N	N	Y	S	E	D	L	E	L	A	S	L
Query Conservation																																								.	.	.
Alig confidence							.												.	.	.	.																		.	.	.
Template Conservation							.												.	.	.	.
Template Sequence		V	L	P	Q	R	.	H	R	I	L	F	E	V	F	D	E	N	.	.	.	.	D	D	F	L	G	Q	V	D	V	P	L	Y	P	L	P	T	E	P	Y	T	F	K	D	F	V	L	H	P	R	S	H	K	S	R	V	K	G	Y	L
Template Known Secondary structure				T	T	T	.												.	.	.	.											S		S			B											B		S	S	T	T					S
Template Predicted Secondary structure							.												.	.	.	.
Template SS confidence
		180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.					.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		1206	.	.	.	1210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	K	I	D	I	F	P	A	K	E	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	K	M	T	Y	L	P	T	H	L	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D