 |
| Job Description | Q62077 | | Confidence | 98.22% | Date | Tue Jul 30 13:20:18 BST 2013 |
| Rank | 184 | Aligned Residues | 79 |
| % Identity | 35% | Template | c3jv3A_ |
| PDB info |
PDB header:protein binding | Chain: A: PDB Molecule:intersectin-1; |
PDBTitle: structure of sh3e-dh unit of murine intersectin-1l
|
| Resolution | 2.40 Å |
|
 |
|   |   |
794 | . | . | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . | . | . | . | . | . | . | 820 | . | . | . | . | . | . | . | . | . | 830 | . | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | . | . | . | . | 850 | . | . | . |
| Predicted Secondary structure |   |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
C | A | V | K | A | L | F | D | Y | K | A | Q | R | E | D | E | L | T | F | T | K | S | A | I | I | Q | N | V | E | K | Q | D | G | G | W | W | R | G | D | Y | G | G | K | K | Q | L | W | F | P | S | N | Y | V | E | E | M | I | N | P | A |
| Query Conservation |   |
  |   |   |
|
|   |   |   |
|   |
|   |   |   |
|
|
|
|
|   |
|   |   |   |
|   |   |
|   |
|   |   |   |   |   |
|
|
|   |
|   |   |   |   |   |   |   |
|
|   |   |   |
|
|   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|
|   |
|   |
|   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
| . |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
| Template Sequence |   |
C | Q | V | I | G | M | Y | D | Y | T | A | Q | N | D | D | E | L | A | F | S | K | G | Q | I | I | N | V | L | N | K | E | D | P | D | W | W | K | G | E | V | S | G | Q | V | G | . |
L | F | P | S | N | Y | V | K | L | T | T | D | M | D |
| Template Known Secondary structure |   |
 |  |  |  |  | S | S |
| B |
|
| S | S | T | T | B |
|
| B |
| T | T |
|  |  |  |  |  |  |
|
| S | T | T |  |  |  |  |  |  | T | T |  |  |  | . |  |  |  | G | G | G |  |  |  | G | G | G | S |
|
| Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
1151 | . | . | . | . | . | . | . | . | 1160 | . | . | . | . | . | . | . | . | . | 1170 | . | . | . | . | . | . | . | . | . | 1180 | . | . | . | . | . | . | . | . | . | 1190 | . | . | . | . | . | |
. | . | . | . | 1200 | . | . | . | . | . | . | . | . | . |
|   |
|   |   |
854 | . | . | . | . | . | 860 | . | . | . | . | . | . | . | . | . | 870 | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
V | L | E | P | E | R | E | H | L | D | E | N | S | P | L | G | D | L | L | R |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
| Template Sequence |   |
P | S | Q | Q | W | C | S | D | L | H | L | L | D | M | L | T | P | T | E | R |
| Template Known Secondary structure |   |
 |  |  |  |  |
| T | T |
| T | T | G | G | G | S |
|  |  |  |  |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
1210 | . | . | . | . | . | . | . | . | . | 1220 | . | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|