Job Description Q62077 Confidence 98.92% Date Tue Jul 30 13:20:18 BST 2013 Rank 156 Aligned Residues 80 % Identity 19% Template c3gxxB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcription elongation factor spt6; PDBTitle: structure of the sh2 domain of the candida glabrata2 transcription elongation factor spt6, crystal form b Resolution 2.40 Å

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		665	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.		.	.	.	700	.	.	.	.	.	.	.	.		.	710	.	.	.	.	.	.	.					.
Predicted Secondary structure																																		.													.										.	.	.	.
Query SS confidence																																		.													.										.	.	.	.
Query Sequence		S	K	E	W	Y	H	A	S	L	T	R	A	Q	A	E	H	M	L	M	R	V	P	R	D	G	A	F	L	V	R	K	R	.	N	E	P	N	S	Y	A	I	S	F	R	A	.	E	G	K	I	K	H	C	R	V	.	.	.	.	Q
Query Conservation																																		.													.										.	.	.	.
Alig confidence								.																.										.													.										.	.	.	.
Template Conservation								.																.
Template Sequence		N	H	P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	R	S	K	E	.	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	D	K	D	L	F	Q	H	V	D	I	Q	E	X	E	K
Template Known Secondary structure		T		T	T	B		.												T	T	S		.	T	T									S	T	T											T	T
Template Predicted Secondary structure								.																.
Template SS confidence
		9	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		719	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	G	Q	T	V	M	L	G	N	S	E	F	D	S	L	V	D	L	I	S	Y	Y	E	K	H	P	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	X	G	K	V	L	V	V	E	G	Q	R	Y	H	D	L	D	Q	I	I	V	E	Y	L	Q	N	K	I
Template Known Secondary structure									S	S	S				S	S
Template Predicted Secondary structure
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D