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Job DescriptionQ62077
Confidence97.46%DateTue Jul 30 13:20:18 BST 2013
Rank418Aligned Residues135
% Identity9%Templatec3dtpF_
PDB info PDB header:contractile proteinChain: F: PDB Molecule:myosin regulatory light chain; PDBTitle: tarantula heavy meromyosin obtained by flexible docking to2 tarantula muscle thick filament cryo-em 3d-map
Resolution20.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   157..160.........170.........180.........190.........200.........210......
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Query Sequence  LRKQFYSVDRNREDRISAKDLKNMLSQVNYRVPNMRFLRERLTDLEQRSGDITYGQFAQL
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Template Sequence  FKEAFQLIDQDKDGFISKNDIRATFDSLGRLCT. . . . EQELDSMVAEAPGPINFTMFLTI
Template Known Secondary structure  GTTT
SSSSS


GGGTTTGGGGSS



....SSSGGG
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   5960.........70.........80.........90. ........100.........110....
 
   217..220.........230.........240.........250.........260.........270......
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Query Sequence  YRSLMYSAQKTMDLPFLETNALRTGERPEHCQVSLSEFQQFLLEYQGELWAVDRLQVQEF
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Template Sequence  FGDRIAGTDEEDVIVNAFNLF. . . . . DEGDGKCKEETLKRSLTTWGEKF. . . SQDEVDQA
Template Known Secondary structure  TSTTTTTTTTT.....S
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   115....120.........130..... ....140.........150........ .160......
 
   277..280.........290.........300........
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Query Sequence  MLSFLRDPLREIEEPYFFLDELVTFLFSKENS
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Template Sequence  LSEA. . . . . PIDGNGLIDIKKFAQILTKGAKE
Template Known Secondary structure  TS.....
B
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TTTSSS

S
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   167..170 .........180.........190...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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