Job Description Q62077 Confidence 99.15% Date Tue Jul 30 13:20:18 BST 2013 Rank 118 Aligned Residues 120 % Identity 23% Template c2nsqA_ PDB info PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase nedd4-like protein; PDBTitle: crystal structure of the c2 domain of the human e3 ubiquitin-protein2 ligase nedd4-like protein Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1089	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130		.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		V	I	C	I	E	V	L	G	A	R	H	L	P	K	N	G	R	G	I	V	C	P	F	V	E	I	E	V	A	G	A	E	Y	D	S	T	K	Q	K	T	E	F	.	V	V	D	N	G	L	N	P	V	W	P	A	K	P	F	H	F
Query Conservation																																												.
Alig confidence																		.	.	.																								.												.
Template Conservation																		.	.	.																																				.
Template Sequence		I	L	R	V	K	V	V	S	G	I	D	L	A	K	K	A	.	.	.	S	D	P	Y	V	K	L	S	L	Y	V	A	D	E	N	R	E	L	A	L	V	Q	T	K	T	I	K	K	T	L	N	P	K	W	N	.	E	E	F	Y	F
Template Known Secondary structure												S						.	.	.												T	T	T	T												S	S		S	S					.
Template Predicted Secondary structure																		.	.	.																																				.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.				.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.
		1148	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.					.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.
Predicted Secondary structure																																										.	.	.	.
Query SS confidence																																										.	.	.	.
Query Sequence		Q	I	S	N	P	E	F	A	F	L	R	F	V	V	Y	E	E	D	M	F	S	D	Q	N	F	L	A	Q	A	T	F	P	V	K	G	L	K	T	G	Y	.	.	.	.	R	A	V	P	L	K	N	N	Y	S	E	D	L	E	L	A
Query Conservation																																										.	.	.	.
Alig confidence									.																																	.	.	.	.
Template Conservation									.
Template Sequence		R	V	N	P	S	N	H	.	R	L	L	F	E	V	F	D	E	N	R	L	T	R	D	D	F	L	G	Q	V	D	V	P	L	S	H	L	P	T	E	D	P	Y	T	F	K	D	F	L	L	R	P	R	S	H	K	S	R	V	K	G
Template Known Secondary structure					T	T	T		.											S	S	S													T	T			B												B		S	S	T	T	S
Template Predicted Secondary structure									.
Template SS confidence
		81	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		1204	.	.	.	.	.	1210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	L	I	K	I	D	I	F	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	R	L	K	M	A	Y	M	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D