Return to main results Retrieve Phyre Job Id

Job DescriptionQ62077
Confidence97.57%DateTue Jul 30 13:20:18 BST 2013
Rank375Aligned Residues63
% Identity17%Templatec2k7cA_
PDB info PDB header:metal binding proteinChain: A: PDB Molecule:calcium-binding protein 1; PDBTitle: nmr structure of mg2+-bound cabp1 c-domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   157..160.........170.........180... ......190.........200.........210.....
Predicted Secondary structure 








.













Query SS confidence 


























.































Query Sequence  LRKQFYSVDRNREDRISAKDLKNMLSQ. VNYRVPNMRFLRERLTDLEQRSGDITYGQFAQ
Query Conservation 
   
   
    
 
   

  

  .

               
    
 
 
 

  
Alig confidence 


























.































Template Conservation 
   
   
 
  
 
   

   
        
  
        
 
 

 
   

  
Template Sequence  LRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVR
Template Known Secondary structure 

SSSS
TT
SSS
S


SS

Template Predicted Secondary structure 























Template SS confidence 



























































   104.....110.........120.........130.........140.........150.........160...
 
   216...
Predicted Secondary structure 
Query SS confidence 



Query Sequence  LYRS
Query Conservation 
   
Alig confidence 



Template Conservation   
 
Template Sequence  MMSR
Template Known Secondary structure 
Template Predicted Secondary structure 

Template SS confidence 



   164...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D