Return to main results Retrieve Phyre Job Id

Job DescriptionQ62077
Confidence97.52%DateTue Jul 30 13:20:18 BST 2013
Rank398Aligned Residues61
% Identity21%Templatec2k7bA_
PDB info PDB header:metal binding proteinChain: A: PDB Molecule:calcium-binding protein 1; PDBTitle: nmr structure of mg2+-bound cabp1 n-domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   157..160.........170.........180.........190.........200.........210......
Predicted Secondary structure 






















Query SS confidence 



























































Query Sequence  LRKQFYSVDRNREDRISAKDLKNMLSQVNYRVPNMRFLRERLTDLEQRSGDITYGQFAQL
Query Conservation 
   
   
    
 
   

  

  

               
    
 
 
 

  
Alig confidence 



























































Template Conservation 
   
   
    
 
   
    
   
          
    
    
 
   

   
Template Sequence  LREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVEL
Template Known Secondary structure 
TTT
S
B
S
S
SSGGGTSSS
B
Template Predicted Secondary structure 






















Template SS confidence 



























































   27..30.........40.........50.........60.........70.........80......
 
   217
Predicted Secondary structure 
Query SS confidence 
Query Sequence  Y
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  M
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   87
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D