Job Description Q62077 Confidence 97.97% Date Tue Jul 30 13:20:18 BST 2013 Rank 224 Aligned Residues 130 % Identity 12% Template c2hpkA_ PDB info PDB header:luminescent protein Chain: A: PDB Molecule:photoprotein berovin; PDBTitle: crystal structure of photoprotein berovin from beroe2 abyssicola Resolution 2.00 Å

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		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.										190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.
Query Sequence		L	R	K	Q	F	Y	S	V	D	R	N	R	E	D	R	I	S	A	K	D	L	K	N	M	L	S	Q	V	N	Y	R	V	P	.	.	.	.	.	.	.	.	.	N	M	R	F	L	R	E	R	L	T	D	L	E	Q	R	S	G	D
Query Conservation																																			.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Y	K	R	F	D	T	F	D	L	D	S	D	G	K	X	E	X	D	E	V	L	Y	W	P	D	R	X	R	Q	L	V	N	A	T	D	E	Q	V	E	K	X	R	D	A	V	R	V	F	F	L	H	K	G	V	E	P	V	N	G
Template Known Secondary structure											T	T		S	S								T										S																					T	T		B	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.													.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	T	Y	G	Q	F	A	Q	L	Y	R	S	L	M	Y	S	A	Q	K	T	.	.	.	.	.	.	.	.	.	.	.	.	M	D	L	P	F	L	E	T	N	A	L	R	T	G	E	R	P	E	H	C	Q	V	S	L	S	E	F	Q
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.
Template Sequence		L	L	R	E	D	W	V	E	A	N	R	V	F	A	E	A	E	R	E	R	E	R	R	G	E	P	S	L	I	A	L	L	S	N	S	Y	Y	D	V	L	.	.	.	.	.	.	D	D	D	G	D	G	T	V	D	V	D	E	L	K
Template Known Secondary structure				G	G	G																		T	T																	.	.	.	.	.	.		T	T		S	S	S	B
Template Predicted Secondary structure																																										.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.							.	.	140	.	.	.	.	.	.	.	.	.	150	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	L	L	E	Y	Q	G	E	L	W	A	V	D	R	L	Q	V	Q	E	F	M	L	S	F	L	R	D	P	L	R	E	I	E	E	P	Y	F	F	L	D	E	L	V	T	F	L
Query Conservation
Alig confidence										.	.	.	.	.													.	.	.	.	.
Template Conservation										.	.	.	.	.													.	.	.	.	.
Template Sequence		T	X	X	K	A	F	D	V	.	.	.	.	.	P	Q	E	A	A	Y	T	F	F	E	K	A	.	.	.	.	.	D	T	D	K	S	G	K	L	E	R	T	E	L	V	H	L	F
Template Known Secondary structure							T	T	S	.	.	.	.	.		T	T										.	.	.	.	.		T	T			S	S	B
Template Predicted Secondary structure										.	.	.	.	.													.	.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.						160	.	.	.	.	.	.	.	.	.	170	.						.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D