 |
| Job Description | Q62077 | | Confidence | 99.48% | Date | Tue Jul 30 13:20:18 BST 2013 |
| Rank | 37 | Aligned Residues | 103 |
| % Identity | 34% | Template | c2hdxB_ |
| PDB info |
PDB header:signaling protein | Chain: B: PDB Molecule:sh2-b ph domain containing signaling mediator 1 |
PDBTitle: crystal structure of the src homology-2 domain of sh2-b in2 complex with jak2 ptyr813 phosphopeptide
|
| Resolution | 2.35 Å |
|
 |
|   |   |
545 | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . |
| Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
H | S | S | E | K | W | F | H | G | K | L | G | A | G | R | D | G | R | H | I | A | E | R | L | L | T | E | Y | C | I | E | T | G | A | P | D | G | S | F | L | V | R | E | S | E | T | F | V | G | D | Y | T | L | S | F | W | R | N | G | K |
| Query Conservation |   |
  |   |   |
|
|
|   |
|
|
|
|   |   |   |   |   |   |
|   |   |
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |   |   |   |
|   |
|   |
|
|   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |   |   |
|
|
|
|   |
|   | . | . | . | . | . |
|   |   |
|
|   |
|
|   |   |   | . | . | . |   |   |   |   |   |
|   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |
| Template Sequence |   |
L | S | G | Y | P | W | F | H | G | M | L | S | . |
. |
. |
. |
. |
R | L | K | A | A | Q | L | V | L | E | G | . |
. |
. |
G | T | G | S | H | G | V | F | L | V | R | Q | S | E | T | R | R | G | E | C | V | L | T | F | N | F | Q | G | K |
| Template Known Secondary structure |   |
G | G | G | S | T | T | B |
|
| S |
|
| . | . | . | . | . |  |  |  |  |  |  |  |  |  | T | T | . | . | . | G | G | G | G | T | T |  |  |  |  |  |  |
| S | S | S | T | T |  |  |  |  |  |  |  |  | T | T |  |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
522 | . | . | . | . | . | . | . | 530 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 540 | . | . | . | . | |
|
|
. | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . |
|   |
|   |   |
605 | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
V | Q | H | C | R | I | H | S | R | Q | D | A | G | T | P | K | F | F | L | T | D | N | L | V | F | D | S | L | Y | D | L | I | T | H | Y | Q | Q | V | P | L | R | C | N | E | F | E | M | R | L | S | E | P | V | P | Q |
| Query Conservation |   |
|   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |
|
|   |   |
|   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |
|   |
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |
|   |   |
|   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |   |   |   |
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |
|
|
|   |
| Template Sequence |   |
A | K | H | L | R | L | S | L | N | A | A | G | . |
. |
. |
. |
Q | C | R | V | Q | H | L | H | F | Q | S | I | F | D | M | L | E | H | F | R | V | H | P | I | P | L | E | S | S | D | V | V | L | V | S | Y | V | P | S |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
| T | T |
| . | . | . | . |
|  |  |  | T | T |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  | S |
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|  |  |
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
574 | . | . | . | . | . | 580 | . | . | . | . | . | |
|
|
|
. | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|