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Job DescriptionQ62077
Confidence99.42%DateTue Jul 30 13:20:18 BST 2013
Rank41Aligned Residues102
% Identity25%Templatec2eo6A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:b-cell linker protein; PDBTitle: solution structure of the sh2 domain from mouse b-cell2 linker protein blnk
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   664.....670.........680.........690...... ...700. ........710.........
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Query Sequence  ESKEWYHASLTRAQAEHMLMRVPRDGAFLVRKR. NEPNS. . YAISFRAEGKIKHCRVQQ.
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Template Sequence  LGKPWYAGACDRKSAEEALHRSNKDGSFLIRKSSGHDSKQPYTLVAFFNKRVYNIPVRFI
Template Known Secondary structure  TT
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TT
B

STT
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   21........30.........40.........50.........60.........70.........80
 
   720...... ...730.........740....... ..750.........760....
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Query Sequence  . EGQTVML. . . . . GNSEFDSLVDLISYYEKHPLY. . . . . . . . . RKMKLRYPINEEALEKI
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Template Sequence  EATKQYALGKKKNGEEYFGSVVEIVNSHQHNPLVLIDSQNNTKDSTRLKYAVKVSSGPSS
Template Known Secondary structure  TTTT
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TT


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   81........90.........100.........110.........120.........130.........140
 
   765
Predicted Secondary structure 
Query SS confidence 
Query Sequence  G
Query Conservation   
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Template Sequence  G
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   141
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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