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Job DescriptionQ62077
Confidence97.72%DateTue Jul 30 13:20:18 BST 2013
Rank310Aligned Residues143
% Identity15%Templatec2ekwC_
PDB info PDB header:contractile proteinChain: C: PDB Molecule:myosin catalytic light chain lc-1, mantle muscle; PDBTitle: the crystal structure of squid myosin s1 in the presence of2 so4 2-
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   157..160..... ....170.........180.........190.........200.........210....
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Query Sequence  LRKQFYSVD. . RNREDRISAKDLKNMLSQVNYRVPNMRFLRERLTDLEQRSGDITYGQFA
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Template Sequence  VREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQ. VHQHGGTKKMGEKAYKLEEIL
Template Known Secondary structure  SSS
GGGT



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   11........20.........30.........40........ .50.........60.........
 
   215....220.........230.........240.........250.........260.........270....
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Query Sequence  QLYRSLMYSAQKTMDLPFLETNALRTGERPEHCQVSLSEFQQFLLEYQGELWAVDRLQVQ
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Template Sequence  PIYEEM. . SSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGE. . . RITEDQCN
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   70..... ....80.........90.........100.........110...... ...120....
 
   275....280.........290.........300........
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Query Sequence  EFMLSFLRDPLREIEEPYFFLDELVTFLFSKENS
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Template Sequence  DIFTFC. . . DIREDIDGNIKYEDLMKKVMAGPFP
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   125....130 .........140.........150.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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